Journal cover Journal topic
Biogeosciences An interactive open-access journal of the European Geosciences Union
Journal topic
Volume 8, issue 9
Biogeosciences, 8, 2547-2560, 2011
https://doi.org/10.5194/bg-8-2547-2011
© Author(s) 2011. This work is distributed under
the Creative Commons Attribution 3.0 License.
Biogeosciences, 8, 2547-2560, 2011
https://doi.org/10.5194/bg-8-2547-2011
© Author(s) 2011. This work is distributed under
the Creative Commons Attribution 3.0 License.

Research article 13 Sep 2011

Research article | 13 Sep 2011

A laboratory experiment of intact polar lipid degradation in sandy sediments

J. Logemann*, J. Graue*, J. Köster, B. Engelen, J. Rullkötter, and H. Cypionka J. Logemann et al.
  • Institute for Chemistry and Biology of the Marine Environment (ICBM), Carl von Ossietzky University of Oldenburg, P.O. Box 2503, 26111 Oldenburg, Germany
  • *These authors contributed equally to this work.

Abstract. Intact polar lipids (IPLs) are considered biomarkers for living biomass. Their degradation in marine sediments, however, is poorly understood and complicates interpretation of their occurrence in geological samples. To investigate the turnover of IPLs, a degradation experiment with anoxic sandy sediments from the North Sea was conducted. Intact cells of two organisms that do not naturally occur in North Sea sediments were chosen as IPL sources: (i) Saccharomyces cerevisiae, representative for ester-bound acyl lipids that also occur in Bacteria, and (ii) the archaeon Haloferax volcanii, representative for ether-bound isoprenoid lipids. Surprisingly, IPLs with phosphoester-bound head groups showed approximately the same degradation rate as IPLs with glycosidic head groups. Furthermore, the results indicate a relatively fast degradation of S. cerevisiae IPLs with ester-bound moieties (analogs of bacterial membrane lipids) and no significant degradation of archaeal IPLs with ether-bound moieties. Pore water and 16S rRNA-based DGGE analysis showed only a minor influence of the IPL source on microbial metabolism and community profiles. Due to our results, the IPL-based quantification of Archaea and Bacteria should be interpreted with caution.

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