Articles | Volume 16, issue 22
https://doi.org/10.5194/bg-16-4377-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
https://doi.org/10.5194/bg-16-4377-2019
© Author(s) 2019. This work is distributed under
the Creative Commons Attribution 4.0 License.
the Creative Commons Attribution 4.0 License.
Research article
| 
19 Nov 2019
Research article |
| 19 Nov 2019
| 19 Nov 2019
Shifts in dimethylated sulfur concentrations and microbiome composition in the red-tide causing dinoflagellate Alexandrium minutum during a simulated marine heatwave
Elisabeth Deschaseaux
CORRESPONDING AUTHOR
University of Technology Sydney, Climate Change Cluster, Ultimo NSW
2007, Australia
James O'Brien
University of Technology Sydney, Climate Change Cluster, Ultimo NSW
2007, Australia
Nachshon Siboni
University of Technology Sydney, Climate Change Cluster, Ultimo NSW
2007, Australia
Katherina Petrou
University of Technology Sydney, Climate Change Cluster, Ultimo NSW
2007, Australia
University of Technology Sydney, School of Life Sciences, Ultimo
NSW 2007, Australia
Justin R. Seymour
University of Technology Sydney, Climate Change Cluster, Ultimo NSW
2007, Australia
Related authors
Hilton B. Swan, Graham B. Jones, Elisabeth S. M. Deschaseaux, and Bradley D. Eyre
Biogeosciences, 14, 229–239, https://doi.org/10.5194/bg-14-229-2017, https://doi.org/10.5194/bg-14-229-2017, 2017
Short summary
Short summary
We measured the sulfur gas dimethylsulfide (DMS) in marine air at a coral cay on the Great Barrier Reef. DMS is well known to be released from the world's oceans, but environmental evidence of coral reefs releasing DMS has not been clearly demonstrated. We showed the coral reef can sometimes release DMS to the air, which was seen as spikes above the DMS released from the ocean. The DMS from the reef supplements the DMS from the ocean to assist formation of clouds that influence local climate.
Zhibo Shao, Yangchun Xu, Hua Wang, Weicheng Luo, Lice Wang, Yuhong Huang, Nona Sheila R. Agawin, Ayaz Ahmed, Mar Benavides, Mikkel Bentzon-Tilia, Ilana Berman-Frank, Hugo Berthelot, Isabelle C. Biegala, Mariana B. Bif, Antonio Bode, Sophie Bonnet, Deborah A. Bronk, Mark V. Brown, Lisa Campbell, Douglas G. Capone, Edward J. Carpenter, Nicolas Cassar, Bonnie X. Chang, Dreux Chappell, Yuh-ling Lee Chen, Matthew J. Church, Francisco M. Cornejo-Castillo, Amália Maria Sacilotto Detoni, Scott C. Doney, Cecile Dupouy, Marta Estrada, Camila Fernandez, Bieito Fernández-Castro, Debany Fonseca-Batista, Rachel A. Foster, Ken Furuya, Nicole Garcia, Kanji Goto, Jesús Gago, Mary R. Gradoville, M. Robert Hamersley, Britt A. Henke, Cora Hörstmann, Amal Jayakumar, Zhibing Jiang, Shuh-Ji Kao, David M. Karl, Leila R. Kittu, Angela N. Knapp, Sanjeev Kumar, Julie LaRoche, Hongbin Liu, Jiaxing Liu, Caroline Lory, Carolin R. Löscher, Emilio Marañón, Lauren F. Messer, Matthew M. Mills, Wiebke Mohr, Pia H. Moisander, Claire Mahaffey, Robert Moore, Beatriz Mouriño-Carballido, Margaret R. Mulholland, Shin-ichiro Nakaoka, Joseph A. Needoba, Eric J. Raes, Eyal Rahav, Teodoro Ramírez-Cárdenas, Christian Furbo Reeder, Lasse Riemann, Virginie Riou, Julie C. Robidart, Vedula V. S. S. Sarma, Takuya Sato, Himanshu Saxena, Corday Selden, Justin R. Seymour, Dalin Shi, Takuhei Shiozaki, Arvind Singh, Rachel E. Sipler, Jun Sun, Koji Suzuki, Kazutaka Takahashi, Yehui Tan, Weiyi Tang, Jean-Éric Tremblay, Kendra Turk-Kubo, Zuozhu Wen, Angelicque E. White, Samuel T. Wilson, Takashi Yoshida, Jonathan P. Zehr, Run Zhang, Yao Zhang, and Ya-Wei Luo
Earth Syst. Sci. Data, 15, 3673–3709, https://doi.org/10.5194/essd-15-3673-2023, https://doi.org/10.5194/essd-15-3673-2023, 2023
Short summary
Short summary
N2 fixation by marine diazotrophs is an important bioavailable N source to the global ocean. This updated global oceanic diazotroph database increases the number of in situ measurements of N2 fixation rates, diazotrophic cell abundances, and nifH gene copy abundances by 184 %, 86 %, and 809 %, respectively. Using the updated database, the global marine N2 fixation rate is estimated at 223 ± 30 Tg N yr−1, which triplicates that using the original database.
Stacy Deppeler, Katherina Petrou, Kai G. Schulz, Karen Westwood, Imojen Pearce, John McKinlay, and Andrew Davidson
Biogeosciences, 15, 209–231, https://doi.org/10.5194/bg-15-209-2018, https://doi.org/10.5194/bg-15-209-2018, 2018
Short summary
Short summary
We combined productivity and photophysiology measurements to investigate the effects of ocean acidification on a natural Antarctic marine microbial community. Our study identifies a threshold for CO2 tolerance in the phytoplankton community between 953 and 1140 μatm of CO2, above which productivity declines. Bacteria were tolerant to CO2 up to 1641 μatm. We identify physiological changes in the phytoplankton at high CO2 that allowed them to acclimate to the high CO2 treatment.
Hilton B. Swan, Graham B. Jones, Elisabeth S. M. Deschaseaux, and Bradley D. Eyre
Biogeosciences, 14, 229–239, https://doi.org/10.5194/bg-14-229-2017, https://doi.org/10.5194/bg-14-229-2017, 2017
Short summary
Short summary
We measured the sulfur gas dimethylsulfide (DMS) in marine air at a coral cay on the Great Barrier Reef. DMS is well known to be released from the world's oceans, but environmental evidence of coral reefs releasing DMS has not been clearly demonstrated. We showed the coral reef can sometimes release DMS to the air, which was seen as spikes above the DMS released from the ocean. The DMS from the reef supplements the DMS from the ocean to assist formation of clouds that influence local climate.
Related subject area
Biogeochemistry: Coastal Ocean
Vertical mixing alleviates autumnal oxygen deficiency in the central North Sea
Hypoxia also occurs in small highly turbid estuaries: the example of the Charente (Bay of Biscay)
Seasonality and response of ocean acidification and hypoxia to major environmental anomalies in the southern Salish Sea, North America (2014–2018)
Oceanographic processes driving low-oxygen conditions inside Patagonian fjords
Above- and belowground plant mercury dynamics in a salt marsh estuary in Massachusetts, USA
Variability and drivers of carbonate chemistry at shellfish aquaculture sites in the Salish Sea, British Columbia
Unusual Hemiaulus bloom influences ocean productivity in Northeastern US Shelf waters
Insights into carbonate environmental conditions in the Chukchi Sea
UAV approaches for improved mapping of vegetation cover and estimation of carbon storage of small saltmarshes: examples from Loch Fleet, northeast Scotland
Iron “ore” nothing: benthic iron fluxes from the oxygen-deficient Santa Barbara Basin enhance phytoplankton productivity in surface waters
Marine anoxia initiates giant sulfur-oxidizing bacterial mat proliferation and associated changes in benthic nitrogen, sulfur, and iron cycling in the Santa Barbara Basin, California Borderland
Quantification and mitigation of bottom trawling impacts on sedimentary organic carbon stocks in the North Sea
Uncertainty in the evolution of northwestern North Atlantic circulation leads to diverging biogeochemical projections
The additionality problem of ocean alkalinity enhancement
Short-term variation in pH in seawaters around coastal areas of Japan: characteristics and forcings
Revisiting the applicability and constraints of molybdenum- and uranium-based paleo redox proxies: comparing two contrasting sill fjords
Influence of a small submarine canyon on biogenic matter export flux in the lower St. Lawrence Estuary, eastern Canada
Ocean alkalinity enhancement using sodium carbonate salts does not impact Fe dynamics in a mesocosm experiment
Single-celled bioturbators: benthic foraminifera mediate oxygen penetration and prokaryotic diversity in intertidal sediment
Assessing impacts of coastal warming, acidification, and deoxygenation on Pacific oyster (Crassostrea gigas) farming: a case study in the Hinase area, Okayama Prefecture, and Shizugawa Bay, Miyagi Prefecture, Japan
Picoplanktonic methane production in eutrophic surface waters
Influence of Ocean Alkalinity Enhancement with Olivine or Steel Slag on a Coastal Plankton Community in Tasmania
Multiple nitrogen sources for primary production inferred from δ13C and δ15N in the southern Sea of Japan
Influence of manganese cycling on alkalinity in the redox stratified water column of Chesapeake Bay
Estuarine flocculation dynamics of organic carbon and metals from boreal acid sulfate soils
Drivers of particle sinking velocities in the Peruvian upwelling system
Intra-scenario variability of trends and controls of near-bed oxygen concentration on the Northwest European Continental Shelf under climate change
Impacts and uncertainties of climate-induced changes in watershed inputs on estuarine hypoxia
Considerations for hypothetical carbon dioxide removal via alkalinity addition in the Amazon River watershed
High metabolism and periodic hypoxia associated with drifting macrophyte detritus in the shallow subtidal Baltic Sea
Production and accumulation of reef framework by calcifying corals and macroalgae on a remote Indian Ocean cay
Zooplankton community succession and trophic links during a mesocosm experiment in the coastal upwelling off Callao Bay (Peru)
Temporal and spatial evolution of bottom-water hypoxia in the St Lawrence estuarine system
Significant nutrient consumption in the dark subsurface layer during a diatom bloom: a case study on Funka Bay, Hokkaido, Japan
Contrasts in dissolved, particulate, and sedimentary organic carbon from the Kolyma River to the East Siberian Shelf
Sediment quality assessment in an industrialized Greek coastal marine area (western Saronikos Gulf)
Limits and CO2 equilibration of near-coast alkalinity enhancement
Role of phosphorus in the seasonal deoxygenation of the East China Sea shelf
Interannual variability of the initiation of the phytoplankton growing period in two French coastal ecosystems
Spatio-temporal distribution, photoreactivity and environmental control of dissolved organic matter in the sea-surface microlayer of the eastern marginal seas of China
Metabolic alkalinity release from large port facilities (Hamburg, Germany) and impact on coastal carbon storage
A Numerical reassessment of the Gulf of Mexico carbon system in connection with the Mississippi River and global ocean
Observed and projected global warming pressure on coastal hypoxia
Benthic alkalinity fluxes from coastal sediments of the Baltic and North seas: comparing approaches and identifying knowledge gaps
Investigating the effect of nickel concentration on phytoplankton growth to assess potential side-effects of ocean alkalinity enhancement
Unprecedented summer hypoxia in southern Cape Cod Bay: an ecological response to regional climate change?
Interannual variabilities, long-term trends, and regulating factors of low-oxygen conditions in the coastal waters off Hong Kong
Causes of the extensive hypoxia in the Gulf of Riga in 2018
Trawling effects on biogeochemical processes are mediated by fauna in high-energy biogenic-reef-inhabited coastal sediments
Drought recorded by Ba∕Ca in coastal benthic foraminifera
Charlotte A. J. Williams, Tom Hull, Jan Kaiser, Claire Mahaffey, Naomi Greenwood, Matthew Toberman, and Matthew R. Palmer
Biogeosciences, 21, 1961–1971, https://doi.org/10.5194/bg-21-1961-2024, https://doi.org/10.5194/bg-21-1961-2024, 2024
Short summary
Short summary
Oxygen (O2) is a key indicator of ocean health. The risk of O2 loss in the productive coastal/continental slope regions is increasing. Autonomous underwater vehicles equipped with O2 optodes provide lots of data but have problems resolving strong vertical O2 changes. Here we show how to overcome this and calculate how much O2 is supplied to the low-O2 bottom waters via mixing. Bursts in mixing supply nearly all of the O2 to bottom waters in autumn, stopping them reaching ecologically low levels.
Sabine Schmidt and Ibrahima Iris Diallo
Biogeosciences, 21, 1785–1800, https://doi.org/10.5194/bg-21-1785-2024, https://doi.org/10.5194/bg-21-1785-2024, 2024
Short summary
Short summary
Along the French coast facing the Bay of Biscay, the large Gironde and Loire estuaries suffer from hypoxia. This prompted a study of the small Charente estuary located between them. This work reveals a minimum oxygen zone in the Charente estuary, which extends for about 25 km. Temperature is the main factor controlling the hypoxia. This calls for the monitoring of small turbid macrotidal estuaries that are vulnerable to hypoxia, a risk expected to increase with global warming.
Simone R. Alin, Jan A. Newton, Richard A. Feely, Samantha Siedlecki, and Dana Greeley
Biogeosciences, 21, 1639–1673, https://doi.org/10.5194/bg-21-1639-2024, https://doi.org/10.5194/bg-21-1639-2024, 2024
Short summary
Short summary
We provide a new multi-stressor data product that allows us to characterize the seasonality of temperature, O2, and CO2 in the southern Salish Sea and delivers insights into the impacts of major marine heatwave and precipitation anomalies on regional ocean acidification and hypoxia. We also describe the present-day frequencies of temperature, O2, and ocean acidification conditions that cross thresholds of sensitive regional species that are economically or ecologically important.
Pamela Linford, Iván Pérez-Santos, Paulina Montero, Patricio A. Díaz, Claudia Aracena, Elías Pinilla, Facundo Barrera, Manuel Castillo, Aida Alvera-Azcárate, Mónica Alvarado, Gabriel Soto, Cécile Pujol, Camila Schwerter, Sara Arenas-Uribe, Pilar Navarro, Guido Mancilla-Gutiérrez, Robinson Altamirano, Javiera San Martín, and Camila Soto-Riquelme
Biogeosciences, 21, 1433–1459, https://doi.org/10.5194/bg-21-1433-2024, https://doi.org/10.5194/bg-21-1433-2024, 2024
Short summary
Short summary
The Patagonian fjords comprise a world region where low-oxygen water and hypoxia conditions are observed. An in situ dataset was used to quantify the mechanism involved in the presence of these conditions in northern Patagonian fjords. Water mass analysis confirmed the contribution of Equatorial Subsurface Water in the advection of the low-oxygen water, and hypoxic conditions occurred when the community respiration rate exceeded the gross primary production.
Ting Wang, Buyun Du, Inke Forbrich, Jun Zhou, Joshua Polen, Elsie M. Sunderland, Prentiss H. Balcom, Celia Chen, and Daniel Obrist
Biogeosciences, 21, 1461–1476, https://doi.org/10.5194/bg-21-1461-2024, https://doi.org/10.5194/bg-21-1461-2024, 2024
Short summary
Short summary
The strong seasonal increases of Hg in aboveground biomass during the growing season and the lack of changes observed after senescence in this salt marsh ecosystem suggest physiologically controlled Hg uptake pathways. The Hg sources found in marsh aboveground tissues originate from a mix of sources, unlike terrestrial ecosystems, where atmospheric GEM is the main source. Belowground plant tissues mostly take up Hg from soils. Overall, the salt marsh currently serves as a small net Hg sink.
Eleanor Simpson, Debby Ianson, Karen E. Kohfeld, Ana C. Franco, Paul A. Covert, Marty Davelaar, and Yves Perreault
Biogeosciences, 21, 1323–1353, https://doi.org/10.5194/bg-21-1323-2024, https://doi.org/10.5194/bg-21-1323-2024, 2024
Short summary
Short summary
Shellfish aquaculture operates in nearshore areas where data on ocean acidification parameters are limited. We show daily and seasonal variability in pH and saturation states of calcium carbonate at nearshore aquaculture sites in British Columbia, Canada, and determine the contributing drivers of this variability. We find that nearshore locations have greater variability than open waters and that the uptake of carbon by phytoplankton is the major driver of pH and saturation state variability.
S. Alejandra Castillo Cieza, Rachel H. R. Stanley, Pierre Marrec, Diana N. Fontaine, E. Taylor Crockford, Dennis J. McGillicuddy Jr., Arshia Mehta, Susanne Menden-Deuer, Emily E. Peacock, Tatiana A. Rynearson, Zoe O. Sandwith, Weifeng Zhang, and Heidi M. Sosik
Biogeosciences, 21, 1235–1257, https://doi.org/10.5194/bg-21-1235-2024, https://doi.org/10.5194/bg-21-1235-2024, 2024
Short summary
Short summary
The coastal ocean in the northeastern USA provides many services, including fisheries and habitats for threatened species. In summer 2019, a bloom occurred of a large unusual phytoplankton, the diatom Hemiaulus, with nitrogen-fixing symbionts. This led to vast changes in productivity and grazing rates in the ecosystem. This work shows that the emergence of one species can have profound effects on ecosystem function. Such changes may become more prevalent as the ocean warms due to climate change.
Claudine Hauri, Brita Irving, Sam Dupont, Rémi Pagés, Donna D. W. Hauser, and Seth L. Danielson
Biogeosciences, 21, 1135–1159, https://doi.org/10.5194/bg-21-1135-2024, https://doi.org/10.5194/bg-21-1135-2024, 2024
Short summary
Short summary
Arctic marine ecosystems are highly susceptible to impacts of climate change and ocean acidification. We present pH and pCO2 time series (2016–2020) from the Chukchi Ecosystem Observatory and analyze the drivers of the current conditions to get a better understanding of how climate change and ocean acidification could affect the ecological niches of organisms.
William Hiles, Lucy C. Miller, Craig Smeaton, and William E. N. Austin
Biogeosciences, 21, 929–948, https://doi.org/10.5194/bg-21-929-2024, https://doi.org/10.5194/bg-21-929-2024, 2024
Short summary
Short summary
Saltmarsh soils may help to limit the rate of climate change by storing carbon. To understand their impacts, they must be accurately mapped. We use drone data to estimate the size of three saltmarshes in NE Scotland. We find that drone imagery, combined with tidal data, can reliably inform our understanding of saltmarsh size. When compared with previous work using vegetation communities, we find that our most reliable new estimates of stored carbon are 15–20 % smaller than previously estimated.
De'Marcus Robinson, Anh L. D. Pham, David J. Yousavich, Felix Janssen, Frank Wenzhöfer, Eleanor C. Arrington, Kelsey M. Gosselin, Marco Sandoval-Belmar, Matthew Mar, David L. Valentine, Daniele Bianchi, and Tina Treude
Biogeosciences, 21, 773–788, https://doi.org/10.5194/bg-21-773-2024, https://doi.org/10.5194/bg-21-773-2024, 2024
Short summary
Short summary
The present study suggests that high release of ferrous iron from the seafloor of the oxygen-deficient Santa Barabara Basin (California) supports surface primary productivity, creating positive feedback on seafloor iron release by enhancing low-oxygen conditions in the basin.
David J. Yousavich, De'Marcus Robinson, Xuefeng Peng, Sebastian J. E. Krause, Frank Wenzhöfer, Felix Janssen, Na Liu, Jonathan Tarn, Franklin Kinnaman, David L. Valentine, and Tina Treude
Biogeosciences, 21, 789–809, https://doi.org/10.5194/bg-21-789-2024, https://doi.org/10.5194/bg-21-789-2024, 2024
Short summary
Short summary
Declining oxygen (O2) concentrations in coastal oceans can threaten people’s ways of life and food supplies. Here, we investigate how mats of bacteria that proliferate on the seafloor of the Santa Barbara Basin sustain and potentially worsen these O2 depletion events through their unique chemoautotrophic metabolism. Our study shows how changes in seafloor microbiology and geochemistry brought on by declining O2 concentrations can help these mats grow as well as how that growth affects the basin.
Lucas Porz, Wenyan Zhang, Nils Gerrit Christiansen, Jan Kossack, Ute Daewel, and Corinna Schrum
EGUsphere, https://doi.org/10.5194/egusphere-2024-399, https://doi.org/10.5194/egusphere-2024-399, 2024
Short summary
Short summary
Seafloor sediments store a large amount of carbon, helping to naturally regulate Earth's climate. If disturbed, some sediment particles can turn into CO2, but this effect is not well understood. Using computer simulations, we found that bottom-contacting fishing gears release about 1 million tons of CO2 per year in the North Sea, one of the most heavily fished regions globally. We show how protecting certain areas could reduce these emissions while also benefitting seafloor-living animals.
Krysten Rutherford, Katja Fennel, Lina Garcia Suarez, and Jasmin G. John
Biogeosciences, 21, 301–314, https://doi.org/10.5194/bg-21-301-2024, https://doi.org/10.5194/bg-21-301-2024, 2024
Short summary
Short summary
We downscaled two mid-century (~2075) ocean model projections to a high-resolution regional ocean model of the northwest North Atlantic (NA) shelf. In one projection, the NA shelf break current practically disappears; in the other it remains almost unchanged. This leads to a wide range of possible future shelf properties. More accurate projections of coastal circulation features would narrow the range of possible outcomes of biogeochemical projections for shelf regions.
Lennart Thomas Bach
Biogeosciences, 21, 261–277, https://doi.org/10.5194/bg-21-261-2024, https://doi.org/10.5194/bg-21-261-2024, 2024
Short summary
Short summary
Ocean alkalinity enhancement (OAE) is a widely considered marine carbon dioxide removal method. OAE aims to accelerate chemical rock weathering, which is a natural process that slowly sequesters atmospheric carbon dioxide. This study shows that the addition of anthropogenic alkalinity via OAE can reduce the natural release of alkalinity and, therefore, reduce the efficiency of OAE for climate mitigation. However, the additionality problem could be mitigated via a variety of activities.
Tsuneo Ono, Daisuke Muraoka, Masahiro Hayashi, Makiko Yorifuji, Akihiro Dazai, Shigeyuki Omoto, Takehiro Tanaka, Tomohiro Okamura, Goh Onitsuka, Kenji Sudo, Masahiko Fujii, Ryuji Hamanoue, and Masahide Wakita
Biogeosciences, 21, 177–199, https://doi.org/10.5194/bg-21-177-2024, https://doi.org/10.5194/bg-21-177-2024, 2024
Short summary
Short summary
We carried out parallel year-round observations of pH and related parameters in five stations around the Japan coast. It was found that short-term acidified situations with Omega_ar less than 1.5 occurred at four of five stations. Most of such short-term acidified events were related to the short-term low salinity event, and the extent of short-term pH drawdown at high freshwater input was positively correlated with the nutrient concentration of the main rivers that flow into the coastal area.
K. Mareike Paul, Martijn Hermans, Sami A. Jokinen, Inda Brinkmann, Helena L. Filipsson, and Tom Jilbert
Biogeosciences, 20, 5003–5028, https://doi.org/10.5194/bg-20-5003-2023, https://doi.org/10.5194/bg-20-5003-2023, 2023
Short summary
Short summary
Seawater naturally contains trace metals such as Mo and U, which accumulate under low oxygen conditions on the seafloor. Previous studies have used sediment Mo and U contents as an archive of changing oxygen concentrations in coastal waters. Here we show that in fjords the use of Mo and U for this purpose may be impaired by additional processes. Our findings have implications for the reliable use of Mo and U to reconstruct oxygen changes in fjords.
Hannah Sharpe, Michel Gosselin, Catherine Lalande, Alexandre Normandeau, Jean-Carlos Montero-Serrano, Khouloud Baccara, Daniel Bourgault, Owen Sherwood, and Audrey Limoges
Biogeosciences, 20, 4981–5001, https://doi.org/10.5194/bg-20-4981-2023, https://doi.org/10.5194/bg-20-4981-2023, 2023
Short summary
Short summary
We studied the impact of submarine canyon processes within the Pointe-des-Monts system on biogenic matter export and phytoplankton assemblages. Using data from three oceanographic moorings, we show that the canyon experienced two low-amplitude sediment remobilization events in 2020–2021 that led to enhanced particle fluxes in the deep-water column layer > 2.6 km offshore. Sinking phytoplankton fluxes were lower near the canyon compared to background values from the lower St. Lawrence Estuary.
David González-Santana, María Segovia, Melchor González-Dávila, Librada Ramírez, Aridane G. González, Leonardo J. Pozzo, Veronica Arnone, Victor Vázquez, Ulf Riebesell, and J. Magdalena Santana-Casiano
EGUsphere, https://doi.org/10.5194/egusphere-2023-2868, https://doi.org/10.5194/egusphere-2023-2868, 2023
Short summary
Short summary
In a recent experiment off the coast of Gran Canaria (Spain), scientists explored a method called Ocean Alkalinization Enhancement (OAE), where carbonate minerals were added to seawater. This process changed the levels of certain ions in the water, affecting its pH and buffering capacity. The researchers were particularly interested in how this could impact the levels of essential trace metals in the water.
Dewi Langlet, Florian Mermillod-Blondin, Noémie Deldicq, Arthur Bauville, Gwendoline Duong, Lara Konecny, Mylène Hugoni, Lionel Denis, and Vincent M. P. Bouchet
Biogeosciences, 20, 4875–4891, https://doi.org/10.5194/bg-20-4875-2023, https://doi.org/10.5194/bg-20-4875-2023, 2023
Short summary
Short summary
Benthic foraminifera are single-cell marine organisms which can move in the sediment column. They were previously reported to horizontally and vertically transport sediment particles, yet the impact of their motion on the dissolved fluxes remains unknown. Using microprofiling, we show here that foraminiferal burrow formation increases the oxygen penetration depth in the sediment, leading to a change in the structure of the prokaryotic community.
Masahiko Fujii, Ryuji Hamanoue, Lawrence Patrick Cases Bernardo, Tsuneo Ono, Akihiro Dazai, Shigeyuki Oomoto, Masahide Wakita, and Takehiro Tanaka
Biogeosciences, 20, 4527–4549, https://doi.org/10.5194/bg-20-4527-2023, https://doi.org/10.5194/bg-20-4527-2023, 2023
Short summary
Short summary
This is the first study of the current and future impacts of climate change on Pacific oyster farming in Japan. Future coastal warming and acidification may affect oyster larvae as a result of longer exposure to lower-pH waters. A prolonged spawning period may harm oyster processing by shortening the shipping period and reducing oyster quality. To minimize impacts on Pacific oyster farming, in addition to mitigation measures, local adaptation measures may be required.
Sandy E. Tenorio and Laura Farías
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-185, https://doi.org/10.5194/bg-2023-185, 2023
Revised manuscript accepted for BG
Short summary
Short summary
Time series studies show that CH4 is highly dynamic on the coastal ocean surface and that planktonic communities are linked to CH4 accumulation as is found in coastal upwelling off Central Chile. We’ve identified the crucial role of picoplankton (>3μm) in CH4 recycling, especially with the addition of methylated substrates (TMA and MPn) during upwelling and non-upwelling periods. These insights improve understanding of surface ocean CH4 recycling, aiding accurate CH4 emissions estimates.
Jiaying A. Guo, Robert F. Strzepek, Kerrie M. Swadling, Ashley T. Townsend, and Lennart T. Bach
EGUsphere, https://doi.org/10.5194/egusphere-2023-2120, https://doi.org/10.5194/egusphere-2023-2120, 2023
Short summary
Short summary
Ocean alkalinity enhancement (OAE) aims to increase atmospheric CO2 sequestration in the oceans by spreading ground alkaline materials into the ocean. To assess the environmental impacts of OAE, we used 53 L microcosms to test how coastal plankton communities respond to OAE with olivine or steel slag as alkalinity sources. Overall, steel slag is much more efficient for CO2 removal than olivine and appears to be induce less changes in the phytoplankton and zooplankton communities.
Taketoshi Kodama, Atsushi Nishimoto, Ken-ichi Nakamura, Misato Nakae, Naoki Iguchi, Yosuke Igeta, and Yoichi Kogure
Biogeosciences, 20, 3667–3682, https://doi.org/10.5194/bg-20-3667-2023, https://doi.org/10.5194/bg-20-3667-2023, 2023
Short summary
Short summary
Carbon and nitrogen are essential elements for organisms; their stable isotope ratios (13C : 12C, 15N : 14N) are useful tools for understanding turnover and movement in the ocean. In the Sea of Japan, the environment is rapidly being altered by human activities. The 13C : 12C of small organic particles is increased by active carbon fixation, and phytoplankton growth increases the values. The 15N : 14N variations suggest that nitrates from many sources contribute to organic production.
Aubin Thibault de Chanvalon, George W. Luther, Emily R. Estes, Jennifer Necker, Bradley M. Tebo, Jianzhong Su, and Wei-Jun Cai
Biogeosciences, 20, 3053–3071, https://doi.org/10.5194/bg-20-3053-2023, https://doi.org/10.5194/bg-20-3053-2023, 2023
Short summary
Short summary
The intensity of the oceanic trap of CO2 released by anthropogenic activities depends on the alkalinity brought by continental weathering. Between ocean and continent, coastal water and estuaries can limit or favour the alkalinity transfer. This study investigate new interactions between dissolved metals and alkalinity in the oxygen-depleted zone of estuaries.
Joonas J. Virtasalo, Peter Österholm, and Eero Asmala
Biogeosciences, 20, 2883–2901, https://doi.org/10.5194/bg-20-2883-2023, https://doi.org/10.5194/bg-20-2883-2023, 2023
Short summary
Short summary
We mixed acidic metal-rich river water from acid sulfate soils and seawater in the laboratory to study the flocculation of dissolved metals and organic matter in estuaries. Al and Fe flocculated already at a salinity of 0–2 to large organic flocs (>80 µm size). Precipitation of Al and Fe hydroxide flocculi (median size 11 µm) began when pH exceeded ca. 5.5. Mn transferred weakly to Mn hydroxides and Co to the flocs. Up to 50 % of Cu was associated with the flocs, irrespective of seawater mixing.
Moritz Baumann, Allanah Joy Paul, Jan Taucher, Lennart Thomas Bach, Silvan Goldenberg, Paul Stange, Fabrizio Minutolo, and Ulf Riebesell
Biogeosciences, 20, 2595–2612, https://doi.org/10.5194/bg-20-2595-2023, https://doi.org/10.5194/bg-20-2595-2023, 2023
Short summary
Short summary
The sinking velocity of marine particles affects how much atmospheric CO2 is stored inside our oceans. We measured particle sinking velocities in the Peruvian upwelling system and assessed their physical and biochemical drivers. We found that sinking velocity was mainly influenced by particle size and porosity, while ballasting minerals played only a minor role. Our findings help us to better understand the particle sinking dynamics in this highly productive marine system.
Giovanni Galli, Sarah Wakelin, James Harle, Jason Holt, and Yuri Artioli
EGUsphere, https://doi.org/10.5194/egusphere-2023-1049, https://doi.org/10.5194/egusphere-2023-1049, 2023
Short summary
Short summary
In this work we looked at the projected change in bottom water oxygen content in an ensemble of ocean climate change models of the North Western European Shelf. What emerged is that, 1. oxygen decreases in all models, 2. in the models with the most warming, a change in circulation patterns is tied to the emergence of low oxygen hotspots in the Eastern North Sea, and, 3. in relatively shallow coastal areas increasing in primary production partially mitigates oxygen decline.
Kyle E. Hinson, Marjorie A. M. Friedrichs, Raymond G. Najjar, Maria Herrmann, Zihao Bian, Gopal Bhatt, Pierre St-Laurent, Hanqin Tian, and Gary Shenk
Biogeosciences, 20, 1937–1961, https://doi.org/10.5194/bg-20-1937-2023, https://doi.org/10.5194/bg-20-1937-2023, 2023
Short summary
Short summary
Climate impacts are essential for environmental managers to consider when implementing nutrient reduction plans designed to reduce hypoxia. This work highlights relative sources of uncertainty in modeling regional climate impacts on the Chesapeake Bay watershed and consequent declines in bay oxygen levels. The results demonstrate that planned water quality improvement goals are capable of reducing hypoxia levels by half, offsetting climate-driven impacts on terrestrial runoff.
Linquan Mu, Jaime B. Palter, and Hongjie Wang
Biogeosciences, 20, 1963–1977, https://doi.org/10.5194/bg-20-1963-2023, https://doi.org/10.5194/bg-20-1963-2023, 2023
Short summary
Short summary
Enhancing ocean alkalinity accelerates carbon dioxide removal from the atmosphere. We hypothetically added alkalinity to the Amazon River and examined the increment of the carbon uptake by the Amazon plume. We also investigated the minimum alkalinity addition in which this perturbation at the river mouth could be detected above the natural variability.
Karl M. Attard, Anna Lyssenko, and Iván F. Rodil
Biogeosciences, 20, 1713–1724, https://doi.org/10.5194/bg-20-1713-2023, https://doi.org/10.5194/bg-20-1713-2023, 2023
Short summary
Short summary
Aquatic plants produce a large amount of organic matter through photosynthesis that, following erosion, is deposited on the seafloor. In this study, we show that plant detritus can trigger low-oxygen conditions (hypoxia) in shallow coastal waters, making conditions challenging for most marine animals. We propose that the occurrence of hypoxia may be underestimated because measurements typically do not consider the region closest to the seafloor, where detritus accumulates.
M. James McLaughlin, Cindy Bessey, Gary A. Kendrick, John Keesing, and Ylva S. Olsen
Biogeosciences, 20, 1011–1026, https://doi.org/10.5194/bg-20-1011-2023, https://doi.org/10.5194/bg-20-1011-2023, 2023
Short summary
Short summary
Coral reefs face increasing pressures from environmental change at present. The coral reef framework is produced by corals and calcifying algae. The Kimberley region of Western Australia has escaped land-based anthropogenic impacts. Specimens of the dominant coral and algae were collected from Browse Island's reef platform and incubated in mesocosms to measure calcification and production patterns of oxygen. This study provides important data on reef building and climate-driven effects.
Patricia Ayón Dejo, Elda Luz Pinedo Arteaga, Anna Schukat, Jan Taucher, Rainer Kiko, Helena Hauss, Sabrina Dorschner, Wilhelm Hagen, Mariona Segura-Noguera, and Silke Lischka
Biogeosciences, 20, 945–969, https://doi.org/10.5194/bg-20-945-2023, https://doi.org/10.5194/bg-20-945-2023, 2023
Short summary
Short summary
Ocean upwelling regions are highly productive. With ocean warming, severe changes in upwelling frequency and/or intensity and expansion of accompanying oxygen minimum zones are projected. In a field experiment off Peru, we investigated how different upwelling intensities affect the pelagic food web and found failed reproduction of dominant zooplankton. The changes projected could severely impact the reproductive success of zooplankton communities and the pelagic food web in upwelling regions.
Mathilde Jutras, Alfonso Mucci, Gwenaëlle Chaillou, William A. Nesbitt, and Douglas W. R. Wallace
Biogeosciences, 20, 839–849, https://doi.org/10.5194/bg-20-839-2023, https://doi.org/10.5194/bg-20-839-2023, 2023
Short summary
Short summary
The deep waters of the lower St Lawrence Estuary and gulf have, in the last decades, experienced a strong decline in their oxygen concentration. Below 65 µmol L-1, the waters are said to be hypoxic, with dire consequences for marine life. We show that the extent of the hypoxic zone shows a seven-fold increase in the last 20 years, reaching 9400 km2 in 2021. After a stable period at ~ 65 µmol L⁻¹ from 1984 to 2019, the oxygen level also suddenly decreased to ~ 35 µmol L-1 in 2020.
Sachi Umezawa, Manami Tozawa, Yuichi Nosaka, Daiki Nomura, Hiroji Onishi, Hiroto Abe, Tetsuya Takatsu, and Atsushi Ooki
Biogeosciences, 20, 421–438, https://doi.org/10.5194/bg-20-421-2023, https://doi.org/10.5194/bg-20-421-2023, 2023
Short summary
Short summary
We conducted repetitive observations in Funka Bay, Japan, during the spring bloom 2019. We found nutrient concentration decreases in the dark subsurface layer during the bloom. Incubation experiments confirmed that diatoms could consume nutrients at a substantial rate, even in darkness. We concluded that the nutrient reduction was mainly caused by nutrient consumption by diatoms in the dark.
Dirk Jong, Lisa Bröder, Tommaso Tesi, Kirsi H. Keskitalo, Nikita Zimov, Anna Davydova, Philip Pika, Negar Haghipour, Timothy I. Eglinton, and Jorien E. Vonk
Biogeosciences, 20, 271–294, https://doi.org/10.5194/bg-20-271-2023, https://doi.org/10.5194/bg-20-271-2023, 2023
Short summary
Short summary
With this study, we want to highlight the importance of studying both land and ocean together, and water and sediment together, as these systems function as a continuum, and determine how organic carbon derived from permafrost is broken down and its effect on global warming. Although on the one hand it appears that organic carbon is removed from sediments along the pathway of transport from river to ocean, it also appears to remain relatively ‘fresh’, despite this removal and its very old age.
Georgia Filippi, Manos Dassenakis, Vasiliki Paraskevopoulou, and Konstantinos Lazogiannis
Biogeosciences, 20, 163–189, https://doi.org/10.5194/bg-20-163-2023, https://doi.org/10.5194/bg-20-163-2023, 2023
Short summary
Short summary
The pollution of the western Saronikos Gulf from heavy metals has been examined through the study of marine sediment cores. It is a deep gulf (maximum depth 440 m) near Athens affected by industrial and volcanic activity. Eight cores were received from various stations and depths and analysed for their heavy metal content and geochemical characteristics. The results were evaluated by using statistical methods, environmental indicators and comparisons with old data.
Jing He and Michael D. Tyka
Biogeosciences, 20, 27–43, https://doi.org/10.5194/bg-20-27-2023, https://doi.org/10.5194/bg-20-27-2023, 2023
Short summary
Short summary
Recently, ocean alkalinity enhancement (OAE) has gained interest as a scalable way to address the urgent need for negative CO2 emissions. In this paper we examine the capacity of different coastlines to tolerate alkalinity enhancement and the time scale of CO2 uptake following the addition of a given quantity of alkalinity. The results suggest that OAE has significant potential and identify specific favorable and unfavorable coastlines for its deployment.
Arnaud Laurent, Haiyan Zhang, and Katja Fennel
Biogeosciences, 19, 5893–5910, https://doi.org/10.5194/bg-19-5893-2022, https://doi.org/10.5194/bg-19-5893-2022, 2022
Short summary
Short summary
The Changjiang is the main terrestrial source of nutrients to the East China Sea (ECS). Nutrient delivery to the ECS has been increasing since the 1960s, resulting in low oxygen (hypoxia) during phytoplankton decomposition in summer. River phosphorus (P) has increased less than nitrogen, and therefore, despite the large nutrient delivery, phytoplankton growth can be limited by the lack of P. Here, we investigate this link between P limitation, phytoplankton production/decomposition, and hypoxia.
Coline Poppeschi, Guillaume Charria, Anne Daniel, Romaric Verney, Peggy Rimmelin-Maury, Michaël Retho, Eric Goberville, Emilie Grossteffan, and Martin Plus
Biogeosciences, 19, 5667–5687, https://doi.org/10.5194/bg-19-5667-2022, https://doi.org/10.5194/bg-19-5667-2022, 2022
Short summary
Short summary
This paper aims to understand interannual changes in the initiation of the phytoplankton growing period (IPGP) in the current context of global climate changes over the last 20 years. An important variability in the timing of the IPGP is observed with a trend towards a later IPGP during this last decade. The role and the impact of extreme events (cold spells, floods, and wind burst) on the IPGP is also detailed.
Lin Yang, Jing Zhang, Anja Engel, and Gui-Peng Yang
Biogeosciences, 19, 5251–5268, https://doi.org/10.5194/bg-19-5251-2022, https://doi.org/10.5194/bg-19-5251-2022, 2022
Short summary
Short summary
Enrichment factors of dissolved organic matter (DOM) in the eastern marginal seas of China exhibited a significant spatio-temporal variation. Photochemical and enrichment processes co-regulated DOM enrichment in the sea-surface microlayer (SML). Autochthonous DOM was more frequently enriched in the SML than terrestrial DOM. DOM in the sub-surface water exhibited higher aromaticity than that in the SML.
Mona Norbisrath, Johannes Pätsch, Kirstin Dähnke, Tina Sanders, Gesa Schulz, Justus E. E. van Beusekom, and Helmuth Thomas
Biogeosciences, 19, 5151–5165, https://doi.org/10.5194/bg-19-5151-2022, https://doi.org/10.5194/bg-19-5151-2022, 2022
Short summary
Short summary
Total alkalinity (TA) regulates the oceanic storage capacity of atmospheric CO2. TA is also metabolically generated in estuaries and influences coastal carbon storage through its inflows. We used water samples and identified the Hamburg port area as the one with highest TA generation. Of the overall riverine TA load, 14 % is generated within the estuary. Using a biogeochemical model, we estimated potential effects on the coastal carbon storage under possible anthropogenic and climate changes.
Le Zhang and Z. George Xue
Biogeosciences, 19, 4589–4618, https://doi.org/10.5194/bg-19-4589-2022, https://doi.org/10.5194/bg-19-4589-2022, 2022
Short summary
Short summary
We adopt a high-resolution carbon model for the Gulf of Mexico (GoM) and calculate the decadal trends of important carbon system variables in the GoM from 2001 to 2019. The GoM surface CO2 values experienced a steady increase over the past 2 decades, and the ocean surface pH is declining. Although carbonate saturation rates remain supersaturated with aragonite, they show a slightly decreasing trend. The northern GoM is a stronger carbon sink than we thought.
Michael M. Whitney
Biogeosciences, 19, 4479–4497, https://doi.org/10.5194/bg-19-4479-2022, https://doi.org/10.5194/bg-19-4479-2022, 2022
Short summary
Short summary
Coastal hypoxia is a major environmental problem of increasing severity. The 21st-century projections analyzed indicate global coastal waters will warm and experience rapid declines in oxygen. The forecasted median coastal trends for increasing sea surface temperature and decreasing oxygen capacity are 48 % and 18 % faster than the rates observed over the last 4 decades. Existing hypoxic areas are expected to worsen, and new hypoxic areas likely will emerge under these warming-related pressures.
Bryce Van Dam, Nele Lehmann, Mary A. Zeller, Andreas Neumann, Daniel Pröfrock, Marko Lipka, Helmuth Thomas, and Michael Ernst Böttcher
Biogeosciences, 19, 3775–3789, https://doi.org/10.5194/bg-19-3775-2022, https://doi.org/10.5194/bg-19-3775-2022, 2022
Short summary
Short summary
We quantified sediment–water exchange at shallow sites in the North and Baltic seas. We found that porewater irrigation rates in the former were approximately twice as high as previously estimated, likely driven by relatively high bioirrigative activity. In contrast, we found small net fluxes of alkalinity, ranging from −35 µmol m−2 h−1 (uptake) to 53 µmol m−2 h−1 (release). We attribute this to low net denitrification, carbonate mineral (re-)precipitation, and sulfide (re-)oxidation.
Jiaying Abby Guo, Robert Strzepek, Anusuya Willis, Aaron Ferderer, and Lennart Thomas Bach
Biogeosciences, 19, 3683–3697, https://doi.org/10.5194/bg-19-3683-2022, https://doi.org/10.5194/bg-19-3683-2022, 2022
Short summary
Short summary
Ocean alkalinity enhancement is a CO2 removal method with significant potential, but it can lead to a perturbation of the ocean with trace metals such as nickel. This study tested the effect of increasing nickel concentrations on phytoplankton growth and photosynthesis. We found that the response to nickel varied across the 11 phytoplankton species tested here, but the majority were rather insensitive. We note, however, that responses may be different under other experimental conditions.
Malcolm E. Scully, W. Rockwell Geyer, David Borkman, Tracy L. Pugh, Amy Costa, and Owen C. Nichols
Biogeosciences, 19, 3523–3536, https://doi.org/10.5194/bg-19-3523-2022, https://doi.org/10.5194/bg-19-3523-2022, 2022
Short summary
Short summary
For two consecutive summers, the bottom waters in southern Cape Cod Bay became severely depleted of dissolved oxygen. Low oxygen levels in bottom waters have never been reported in this area before, and this unprecedented occurrence is likely the result of a new algae species that recently began blooming during the late-summer months. We present data suggesting that blooms of this new species are the result of regional climate change including warmer waters and changes in summer winds.
Zheng Chen, Bin Wang, Chuang Xu, Zhongren Zhang, Shiyu Li, and Jiatang Hu
Biogeosciences, 19, 3469–3490, https://doi.org/10.5194/bg-19-3469-2022, https://doi.org/10.5194/bg-19-3469-2022, 2022
Short summary
Short summary
Deterioration of low-oxygen conditions in the coastal waters off Hong Kong was revealed by monitoring data over two decades. The declining wind forcing and the increasing nutrient input contributed significantly to the areal expansion and intense deterioration of low-oxygen conditions. Also, the exacerbated eutrophication drove a shift in the dominant source of organic matter from terrestrial inputs to in situ primary production, which has probably led to an earlier onset of hypoxia in summer.
Stella-Theresa Stoicescu, Jaan Laanemets, Taavi Liblik, Māris Skudra, Oliver Samlas, Inga Lips, and Urmas Lips
Biogeosciences, 19, 2903–2920, https://doi.org/10.5194/bg-19-2903-2022, https://doi.org/10.5194/bg-19-2903-2022, 2022
Short summary
Short summary
Coastal basins with high input of nutrients often suffer from oxygen deficiency. In summer 2018, the extent of oxygen depletion was exceptional in the Gulf of Riga. We analyzed observational data and found that extensive oxygen deficiency appeared since the water layer close to the seabed, where oxygen is consumed, was separated from the surface layer. The problem worsens if similar conditions restricting vertical transport of oxygen occur more frequently in the future.
Justin C. Tiano, Jochen Depestele, Gert Van Hoey, João Fernandes, Pieter van Rijswijk, and Karline Soetaert
Biogeosciences, 19, 2583–2598, https://doi.org/10.5194/bg-19-2583-2022, https://doi.org/10.5194/bg-19-2583-2022, 2022
Short summary
Short summary
This study gives an assessment of bottom trawling on physical, chemical, and biological characteristics in a location known for its strong currents and variable habitats. Although trawl gears only removed the top 1 cm of the seabed surface, impacts on reef-building tubeworms significantly decreased carbon and nutrient cycling. Lighter trawls slightly reduced the impact on fauna and nutrients. Tubeworms were strongly linked to biogeochemical and faunal aspects before but not after trawling.
Inda Brinkmann, Christine Barras, Tom Jilbert, Tomas Næraa, K. Mareike Paul, Magali Schweizer, and Helena L. Filipsson
Biogeosciences, 19, 2523–2535, https://doi.org/10.5194/bg-19-2523-2022, https://doi.org/10.5194/bg-19-2523-2022, 2022
Short summary
Short summary
The concentration of the trace metal barium (Ba) in coastal seawater is a function of continental input, such as riverine discharge. Our geochemical records of the severely hot and dry year 2018, and following wet year 2019, reveal that prolonged drought imprints with exceptionally low Ba concentrations in benthic foraminiferal calcium carbonates of coastal sediments. This highlights the potential of benthic Ba / Ca to trace past climate extremes and variability in coastal marine records.
Cited articles
Alcolombri, U., Ben-Dor, S., Feldmesser, E., Levin, Y., Tawfik, D. S., and
Vardi, A.: Identification of the algal dimethyl sulfide-releasing enzyme: A
missing link in the marine sulfur cycle, Science, 348, 1466–1469,
https://doi.org/10.1126/science.aab1586, 2015.
Anderson, D. M.: Physiology and bloom dynamics of toxic Alexandrium species,
with emphasis on life cycle transitions, Nato Asi Series G Ecological
Sciences, 41, 29–48, 1998.
Anderson, D. M., Alpermann, T. J., Cembella, A. D., Collos, Y., Masseret,
E., and Montresor, M.: The globally distributed genus Alexandrium:
multifaceted roles in marine ecosystems and impacts on human health, Harmful
Algae, 14, 10–35, 2012.
Berdalet, E., Llaveria, G., and Simó, R.: Modulation of
dimethylsulfoniopropionate (DMSP) concentration in an Alexandrium minutum
(Dinophyceae) culture by small-scale turbulence: A link to toxin
production?, Harmful Algae, 11, 88–95, https://doi.org/10.1016/j.hal.2011.08.003, 2011.
Brimblecombe, P. and Shooter, D.: Photooxidation of dimethylsulfide in
aqueous-solution, Mar. Chem., 19, 343–353, 1986.
Caporaso, J. G., Kuczynski, J., Stombaugh, J., Bittinger, K., Bushman, F.
D., Costello, E. K., Fierer, N., Peña, A. G., Goodrich, J. K., and
Gordon, J. I.: QIIME allows analysis of high-throughput community sequencing
data, Nat. Methods, 7, 335–336, 2010.
Caruana, A. M. N. and Malin, G.: The variability in DMSP content and DMSP
lyase activity in marine dinoflagellates, Prog. Oceanogr., 120,
410–424, https://doi.org/10.1016/j.pocean.2013.10.014, 2014.
Charlson, R. J., Lovelock, J. E., Andreae, M. O., and Warren, S. G.: Oceanic
phytoplankton, atmospheric sulfur, cloud albedo and climate, Nature, 326,
655–661, 1987.
Chen, Y., Patel, N. A., Crombie, A., Scrivens, J. H., and Murrell, J. C.:
Bacterial flavin-containing monooxygenase is trimethylamine monooxygenase,
P. Natl. Acad. Sci. USA, 108, 17791–17796, 2011.
Cloern, J. E., Schraga, T. S., and Lopez, C. B.: Heat wave brings an
unprecedented red tide to San Francisco Bay, Eos, Transactions American
Geophysical Union, 86, 66–66, 2005.
Curson, A. R., Todd, J. D., Sullivan, M. J., and Johnston, A. W.: Catabolism
of dimethylsulphoniopropionate: microorganisms, enzymes and genes, Nat. Rev.
Microbiol., 9, 849–859, 2011.
Curson, A. R. J., Rogers, R., Todd, J. D., Brearley, C. A., and Johnston, A.
W. B.: Molecular genetic analysis of a dimethylsulfoniopropionate lyase that
liberates the climate-changing gas dimethylsulfide in several marine
alpha-proteobacteria and Rhodobacter sphaeroides, Environ. Microbiol., 10, 1099–1099,
https://doi.org/10.1111/j.1462-2920.2008.01592.x, 2008.
Curson, A. R. J., Liu, J., Martínez, A. B., Green, R. T., Chan, Y.,
Carrión, O., Williams, B. T., Zhang, S.-H., Yang, G.-P., and Page, P. C. B.:
Dimethylsulfoniopropionate biosynthesis in marine bacteria and
identification of the key gene in this process, Nat. Microbiol., 2, 17009, 1–9, 2017.
DeBose, J. L., Lema, S. C., and Nevitt, G. A.: Dimethylsulfoniopropionate as
a foraging cue for reef fishes, Science, 319, 1356–1356,
https://doi.org/10.1126/science.1151109, 2008.
Del Valle, D. A., Slezak, D., Smith, C. M., Rellinger, A. N., Kieber, D. J.,
Kiene, R. P.: Effect of acidification on preservation of DMSP in seawater
and phytoplankton cultures: Evidence for rapid loss and cleavage of DMSP in
samples containing Phaeocystis sp., Mar. Chem., 124, 57–67, 2011.
Deschaseaux, E. S. M., Jones, G. B., Deseo, M. A., Shepherd, K. M., Kiene,
R. P., Swan, H. B., Harrison, P. L., and Eyre, B. D.: Effects of
environmental factors on dimethylated sulphur compounds and their potential
role in the antioxidant system of the coral holobiont, Limnol. Oceanogr.,
59, 758–768, 2014a.
Deschaseaux, E. S. M., Kiene, R. P., Jones, G. B., Deseo, M. A., Swan, H.
B., Oswald, L., and Eyre, B. D.: Dimethylsulphoxide (DMSO) in biological
samples: A comparison of the TiCl3 and NaBH4 reduction methods using
headspace analysis, Mar. Chem., 164, 9–15,
https://doi.org/10.1016/j.marchem.2014.05.004, 2014b.
Edgar, R. C.: Search and clustering orders of magnitude faster than BLAST,
Bioinformatics, 26, 2460–2461, 2010.
Falk, S., Maxwell, D. P., Laudenbach, D. E., and Huner, N. P.:
Photosynthetic adjustment to temperature, in: Photosynthesis and the
environment, Springer, 367–385, 1996.
Finkel, Z. V., Beardall, J., Flynn, K. J., Quigg, A., Rees, T. A. V., and
Raven, J. A.: Phytoplankton in a changing world: cell size and elemental
stoichiometry, J. Plankton Res., 32, 119–137, 2009.
Frölicher, T. L. and Laufkötter, C.: Emerging risks from marine
heat waves, Nat. Commun., 9, 650, https://doi.org/10.1038/s41467-018-03163-6, 2018.
Hallegraeff, G. M.: Ocean climate change, phytoplankton community responses,
and harmful algal blooms: a formidable predictive challenge, J. Phycol., 46,
220–235, https://doi.org/10.1111/j.1529-8817.2010.00815.x, 2010.
Hammer, Ø., Harper, D., and Ryan, P.: PAST-palaeontological statistics, ver. 1.89, Paleontological Museum, University of Oslo, Noruega, available at: http://folk.uio.no/ohammer/past/index.html (last access: August 2017), 2008.
Harley, C. D. G., Hughes, A. R., Hultgren, K. M., Miner, B. G., Sorte, C. J.
B., Thornber, C. S., Rodriguez, L. F., Tomanek, L., and Williams, S. L.: The
impacts of climate change in coastal marine systems, Ecol. Lett., 9,
228–241, https://doi.org/10.1111/j.1461-0248.2005.00871.x, 2006.
Hobday, A. J., Alexander, L. V., Perkins, S. E., Smale, D. A., Straub, S.
C., Oliver, E. C., Benthuysen, J. A., Burrows, M. T., Donat, M. G., and
Feng, M.: A hierarchical approach to defining marine heatwaves, Prog.
Oceanogr., 141, 227–238, 2016.
Howard, E. C., Henriksen, J. R., Buchan, A., Reisch, C. R., Bürgmann,
H., Welsh, R., Ye, W., González, J. M., Mace, K., and Joye, S. B.:
Bacterial taxa that limit sulfur flux from the ocean, Science, 314, 649–652,
2006.
Hughes, T. P., Kerry, J. T., Álvarez-Noriega, M., Álvarez-Romero, J.
G., Anderson, K. D., Baird, A. H., Babcock, R. C., Beger, M., Bellwood, D.
R., and Berkelmans, R.: Global warming and recurrent mass bleaching of
corals, Nature, 543, 373–377, 2017.
Iglesias-Prieto, R., Matta, J. L., Robins, W. A., and Trench, R. K.:
Photosynthetic response to elevated temperature in the symbiotic
dinoflagellate Symbiodinium microadriaticum in culture, P. Natl. Acad. Sci. USA, 89,
10302–10305, 1992.
IPCC: Climate change 2007: The physical science basis. Contribution of
working group II to the fourth assessment report of the Intergovernmental
Panel on Climate Change, Cambridge, United Kingdom and New York, 2007.
IPCC: The physical science basis: working group I contribution to the fifth
assessment report of the intergovernmental panel of climate change,
Cambridge, United Kingdom and New York, 2013.
Jean, N., Boge, G., Jamet, J. L., Richard, S., and Jamet, D.: Annual
contribution of different plankton size classes to particulate
dimethylsulfoniopropionate in a marine perturbed ecosystem, J. Mar. Syst., 53, 235–247,
2005.
Joint, I. and Smale, D. A.: Marine heatwaves and optimal temperatures for
microbial assemblage activity, FEMS Microbiol. Ecol., 93, 1–9, 2017.
Kessler, R. W., Weiss, A., Kuegler, S., Hermes, C., and Wichard, T.:
Macroalgal–bacterial interactions: Role of dimethylsulfoniopropionate in
microbial gardening by Ulva (Chlorophyta), Mol. Ecol., 27, 1808–1819, 2018.
Kiene, R. P. and Gerard, G.: Determination of trace levels of
dimethylsulfoxide (DMSO) in seawater and rainwater, Mar. Chem., 47, 1–12,
1994.
Kiene, R. P. and Slezak, D.: Low dissolved DMSP concentrations in seawater
revealed by small-volume gravity filtration and dialysis sampling, Limnol.
Oceanogr. Meth., 4, 80–95, 2006.
Kiene, R. P., Linn, L. J., and Bruton, J. A.: New and important roles for
DMSP in marine microbial communities, J. Sea. Res., 43, 209–224, 2000.
Knight, K.: Hatchling loggerhead turtles pick up DMS, J. Exp. Biol., 215, 3535–3538,
2012.
Kuczynski, J., Stombaugh, J., Walters, W. A., González, A., Caporaso, J.
G., and Knight, R.: Using QIIME to analyze 16S rRNA gene sequences from
microbial communities, Current protocols in microbiology, 1E, 5.1-1E, 5.20,
2012.
Laabir, M., Jauzein, C., Genovesi, B., Masseret, E., Grzebyk, D., Cecchi,
P., Vaquer, A., Perrin, Y., and Collos, Y.: Influence of temperature,
salinity and irradiance on the growth and cell yield of the harmful red tide
dinoflagellate Alexandrium catenella colonizing Mediterranean waters, J.
Plankton Res., 33, 1550–1563, 2011.
Lane, D. J.: 16S/23S rRNA sequencing, in: Nucleic acid techniques in
bacterial systematics, edited by: Stackebrandt, E. and Goodfellow, M., John
Wiley and Sons, New York, NY, 115–175, 1991.
Lesser, M. P.: Oxidative stress in marine environments: Biochemistry and
physiological ecology, Annu. Rev. Physiol., 68, 253–278,
https://doi.org/10.1146/annurev.physiol.68.040104.110001, 2006.
Marie, D., Partensky, F., Jacquet, S., and Vaulot, D.: Enumeration and cell cycle analysis of natural populations of marine picoplankton by flow cytometry using the nucleic acid stain SYBR Green I, Appl. Environ. Microbiol., 63, 186–193, 1997.
McLenon, A. L. and DiTullio, G. R.: Effects of increased temperature on
dimethylsulfoniopropionate (DMSP) concentration and methionine synthase
activity in Symbiodinium microadriaticum, Biogeochem., 110, 17–29, https://doi.org/10.1007/s10533-012-9733-0, 2012.
Nevitt, G. A., Veit, R. R., and Kareiva, P.: Dimethyl sulfide as a foraging
cue for Antarctic procellariform seabirds, Nature, 376, 680–682,
https://doi.org/10.1038/376680ao, 1995.
Niki, T., Kunugi, M., and Otsuki, A.: DMSP-lyase activity in five marine
phytoplankton species: its potential importance in DMS production, Mar.
Biol., 136, 759–764, 2000.
Oliver, E. C. J., Donat, M. G., Burrows, M. T., Moore, P. J., Smale, D. A.,
Alexander, L. V., Benthuysen, J. A., Feng, M., Sen Gupta, A., Hobday, A. J.,
Holbrook, N. J., Perkins-Kirkpatrick, S. E., Scannell, H. A., Straub, S. C.,
and Wernberg, T.: Longer and more frequent marine heatwaves over the past
century, Nat. Commun., 9, 1324, https://doi.org/10.1038/s41467-018-03732-9, 2018.
Quast, C., Pruesse, E., Yilmaz, P., Gerken, J., Schweer, T., Yarza, P.,
Peplies, J., and Glöckner, F. O.: The SILVA ribosomal RNA gene database
project: improved data processing and web-based tools, Nucleic Acids
Res., 41, D590–D596, 2012.
Rajadurai, M., Poornima, E. H., Narasimhan, S. V., Rao, V. N. R., and
Venugopalan, V. P.: Phytoplankton growth under temperature stress:
Laboratory studies using two diatoms from a tropical coastal power station
site, J. Therm. Biol., 30, 299–305,
https://doi.org/10.1016/j.jtherbio.2005.01.003, 2005.
Rastogi, R. P., Singh, S. P., Häder, D.-P., and Sinha, R. P.: Detection
of reactive oxygen species (ROS) by the oxidant-sensing probe 2′,
7′-dichlorodihydrofluorescein diacetate in the cyanobacterium
Anabaena variabilis PCC 7937, Biochem. Bioph. Res. Co., 397, 603–607, 2010.
Riedel, T., Spring, S., Fiebig, A., Scheuner, C., Petersen, J., Göker,
M., and Klenk, H. P.: Genome sequence of the roseovarius mucosus type strain
(Dsm 17069T), a bacteriochlorophyll a-containing representative of the
marine roseobacter group isolated from the dinoflagellate alexandrium
ostenfeldii, Stand. Genomic Sci., 10, 1–12, https://doi.org/10.1186/1944-3277-10-17,
2015.
Robison, J. D. and Warner, M. E.: Differential impacts of photoacclimation
and thermal stress on the photobiology of four different phylotypes of
Symbiodinium (pyrrhophyta) 1, J. Phycol., 42, 568–579, 2006.
Seymour J. R.,
Sim, R., Ahmed, T., and Stocker, R.: Chemoattraction to
dimethylsulfoniopropionate throughout the marine microbial food web,
Science, 329, 342–345, 2010.
Simó, R., Pedrós-Alió, C., Malin, G., and Grimalt, J. O.:
Biological turnover of DMS, DMSP and DMSO in contrasting open-sea waters,
Mar. Ecol. Prog. Ser., 230, 1–11, 2000.
Simó, R.: Production of atmospheric sulfur by oceanic plankton:
biogeochemical, ecological and evolutionary links, Trends Ecol.
Evol., 16, 287–294, 2001.
Stefels, J.: Physiological aspects of the production and conversion of DMSP
in marine algae and higher plants, J. Sea. Res., 43, 183–197, 2000.
Stefels, J. and van Leeuwe, M. A.: Effects of iron and light stress on the
biochemical composition of Antarctic Phaeocystis sp. (Prymnesiophyceae). I.
Intracellular DMSP concentrations, J. Phycol., 34, 486–495,
https://doi.org/10.1046/j.1529-8817.1998.340486.x, 1998.
Sunda, W., Kieber, D. J., Kiene, R. P., and Huntsman, S.: An antioxidant
function for DMSP and DMS in marine algae, Nature, 418, 317–320, 2002.
Todd, J. D., Rogers, R., Li, Y. G., Wexler, M., Bond, P. L., Sun, L.,
Curson, A. R. J., Malin, G., Steinke, M., and Johnston, A. W. B.: Structural
and regulatory genes required to make the gas dimethyl sulfide in bacteria,
Science, 315, 666–669, https://doi.org/10.1126/science.1135370, 2007.
Todd, J. D., Curson, A. R. J., Dupont, C. L., Nicholson, P., and Johnston,
A. W. B.: The dddP gene, encoding a novel enzyme that converts
dimethylsulfoniopropionate into dimethyl sulfide, is widespread in ocean
metagenomes and marine bacteria and also occurs in some Ascomycete fungi,
Environ. Microbiol., 11, 1376–1385, https://doi.org/10.1111/j.1462-2920.2009.01864.x, 2009.
Tortell, P. D., Payne, C. D., Li, Y., Trimborn, S., Rost, B., Smith, W. O.,
Riesselman, C., Dunbar, R. B., Sedwick, P., and DiTullio, G. R.: CO2
sensitivity of Southern Ocean phytoplankton, Geophys. Res. Lett., 35, L04605, https://doi.org/10.1029/2007GL032583, 2008.
Turner, S., Pryer, K. M., Miao, V. P., and Palmer, J. D.: Investigating deep
phylogenetic relationships among cyanobacteria and plastids by small subunit
rRNA sequence analysis, J. Eukaryot. Microbiol., 46, 327–338,
1999.
Ummenhofer, C. C. and Meehl, G. A.: Extreme weather and climate events with
ecological relevance: a review, Phil. Trans. R. Soc. B, 372, 20160135, https://doi.org/10.1098/rstb.2016.0135, 2017.
Van Alstyne, K. L., Wolfe, G. V., Freidenburg, T. L., Neill, A., and Hicken,
C.: Activated defense systems in marine macroalgae: evidence for an
ecological role for DMSP cleavage, Mar. Ecol. Prog. Ser., 213, 53–65, 2001.
Van Rijssel, M. and Gieskes, W. W. C.: Temperature, light, and the
dimethylsulfoniopropionate (DMSP) content of Emiliania huxleyi (Prymnesiophyceae), J. Sea.
Res., 48, 17–27, 2002.
Veldhuis, M. J., Kraay, G. W., and Timmermans, K. R.: Cell death in
phytoplankton: correlation between changes in membrane permeability,
photosynthetic activity, pigmentation and growth, Eur. J.
Phycology, 36, 167–177, 2001.
Wolfe, G. V., Strom, S. L., Holmes, J. L., Radzio, T., and Olson, M. B.:
Dimethylsulfoniopropionate cleavage by marine phytoplankton in response to
mechanical, chemical, or dark stress, J. Phycol., 38, 948–960,
https://doi.org/10.1046/j.1529-8817.2002.t01-1-01100.x, 2002.
Yilmaz, P., Parfrey, L. W., Yarza, P., Gerken, J., Pruesse, E., Quast, C.,
Schweer, T., Peplies, J., Ludwig, W., and Glöckner, F. O.: The SILVA and
“all-species living tree project (LTP)” taxonomic frameworks, Nucleic
Acids Res., 42, D643–D648, 2013.
Zhou, C. X., Xu, J. L., Yan, X. J., Hou, Y. D., and Jiang, Y.: Analysis of
dimethylsulfide and dimethylsulfoniopropionate in marine microalgae culture,
Chin. J. Anal. Chem., 37, 1308–1312, 2009.
Short summary
Here we report that abrupt increases in temperature–simulating marine heatwaves might have the potential to shape the physiological state and biogenic sulfur production in microalgae involved in harmful algal blooms. Changes in physiology and biochemistry seem to trigger a shift in the bacteria community associated with these microalgae. Since microalgae and associated bacteria play an important role in climate regulation, this could have serious consequences for our future ocean and climate.
Here we report that abrupt increases in temperature–simulating marine heatwaves might have the...
Altmetrics
Final-revised paper
Preprint