Articles | Volume 14, issue 1
https://doi.org/10.5194/bg-14-111-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-14-111-2017
© Author(s) 2017. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
10 Jan 2017
Research article |
| 10 Jan 2017
Tree–grass phenology information improves light use efficiency modelling of gross primary productivity for an Australian tropical savanna
Caitlin E. Moore
CORRESPONDING AUTHOR
School of Earth, Atmosphere and Environment, Monash University,
Clayton, VIC, 3800, Australia
School of Earth and Environment, University of Western
Australia, Crawley, WA, 6009, Australia
Jason Beringer
School of Earth, Atmosphere and Environment, Monash University,
Clayton, VIC, 3800, Australia
School of Earth and Environment, University of Western
Australia, Crawley, WA, 6009, Australia
Bradley Evans
Department of Environmental Sciences, University of Sydney,
Eveleigh, NSW, 2015, Australia
Terrestrial Ecosystem Research Network Ecosystem Modelling and
Scaling Infrastructure, University of Sydney, Eveleigh, NSW, 2015,
Australia
Lindsay B. Hutley
School of Environment, Research Institute for the Environment and
Livelihoods, Charles Darwin University, Casuarina, NT, 0909, Australia
Nigel J. Tapper
School of Earth, Atmosphere and Environment, Monash University,
Clayton, VIC, 3800, Australia
Related authors
Caitlin E. Moore, Tim Brown, Trevor F. Keenan, Remko A. Duursma, Albert I. J. M. van Dijk, Jason Beringer, Darius Culvenor, Bradley Evans, Alfredo Huete, Lindsay B. Hutley, Stefan Maier, Natalia Restrepo-Coupe, Oliver Sonnentag, Alison Specht, Jeffrey R. Taylor, Eva van Gorsel, and Michael J. Liddell
Biogeosciences, 13, 5085–5102, https://doi.org/10.5194/bg-13-5085-2016, https://doi.org/10.5194/bg-13-5085-2016, 2016
Short summary
Short summary
Australian vegetation phenology is highly variable due to the diversity of ecosystems on the continent. We explore continental-scale variability using satellite remote sensing by broadly classifying areas as seasonal, non-seasonal, or irregularly seasonal. We also examine ecosystem-scale phenology using phenocams and show that some broadly non-seasonal ecosystems do display phenological variability. Overall, phenocams are useful for understanding ecosystem-scale Australian vegetation phenology.
Caitlin E. Moore, Jason Beringer, Bradley Evans, Lindsay B. Hutley, Ian McHugh, and Nigel J. Tapper
Biogeosciences, 13, 2387–2403, https://doi.org/10.5194/bg-13-2387-2016, https://doi.org/10.5194/bg-13-2387-2016, 2016
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Savannas cover 20 % of the global land surface and account for 25 % of global terrestrial carbon uptake. They support 20 % of the world’s human population and are one of the most important ecosystems on our planet. We evaluated the temporal partitioning of carbon between overstory and understory in Australian tropical savanna using eddy covariance. We found the understory contributed ~ 32 % to annual productivity, increasing to 40 % in the wet season, thus driving seasonality in carbon uptake.
Bimal K. Bhattacharya, Kaniska Mallick, Devansh Desai, Ganapati S. Bhat, Ross Morrison, Jamie R. Clevery, William Woodgate, Jason Beringer, Kerry Cawse-Nicholson, Siyan Ma, Joseph Verfaillie, and Dennis Baldocchi
Biogeosciences, 19, 5521–5551, https://doi.org/10.5194/bg-19-5521-2022, https://doi.org/10.5194/bg-19-5521-2022, 2022
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Evaporation retrieval in heterogeneous ecosystems is challenging due to empirical estimation of ground heat flux and complex parameterizations of conductances. We developed a parameter-sparse coupled ground heat flux-evaporation model and tested it across different limits of water stress and vegetation fraction in the Northern/Southern Hemisphere. The model performed particularly well in the savannas and showed good potential for evaporative stress monitoring from thermal infrared satellites.
Remko C. Nijzink, Jason Beringer, Lindsay B. Hutley, and Stanislaus J. Schymanski
Geosci. Model Dev., 15, 883–900, https://doi.org/10.5194/gmd-15-883-2022, https://doi.org/10.5194/gmd-15-883-2022, 2022
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The Vegetation Optimality Model (VOM) is a coupled water–vegetation model that predicts vegetation properties rather than determines them based on observations. A range of updates to previous applications of the VOM has been made for increased generality and improved comparability with conventional models. This showed that there is a large effect on the simulated water and carbon fluxes caused by the assumption of deep groundwater tables and updated soil profiles in the model.
Remko C. Nijzink, Jason Beringer, Lindsay B. Hutley, and Stanislaus J. Schymanski
Hydrol. Earth Syst. Sci., 26, 525–550, https://doi.org/10.5194/hess-26-525-2022, https://doi.org/10.5194/hess-26-525-2022, 2022
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Most models that simulate water and carbon exchanges with the atmosphere rely on information about vegetation, but optimality models predict vegetation properties based on general principles. Here, we use the Vegetation Optimality Model (VOM) to predict vegetation behaviour at five savanna sites. The VOM overpredicted vegetation cover and carbon uptake during the wet seasons but also performed similarly to conventional models, showing that vegetation optimality is a promising approach.
Atbin Mahabbati, Jason Beringer, Matthias Leopold, Ian McHugh, James Cleverly, Peter Isaac, and Azizallah Izady
Geosci. Instrum. Method. Data Syst., 10, 123–140, https://doi.org/10.5194/gi-10-123-2021, https://doi.org/10.5194/gi-10-123-2021, 2021
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We reviewed eight algorithms to estimate missing values of environmental drivers and three major fluxes in eddy covariance time series. Overall, machine-learning algorithms showed superiority over the rest. Among the top three models (feed-forward neural networks, eXtreme Gradient Boost, and random forest algorithms), the latter showed the most solid performance in different scenarios.
Naika Meili, Gabriele Manoli, Paolo Burlando, Elie Bou-Zeid, Winston T. L. Chow, Andrew M. Coutts, Edoardo Daly, Kerry A. Nice, Matthias Roth, Nigel J. Tapper, Erik Velasco, Enrique R. Vivoni, and Simone Fatichi
Geosci. Model Dev., 13, 335–362, https://doi.org/10.5194/gmd-13-335-2020, https://doi.org/10.5194/gmd-13-335-2020, 2020
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We developed a novel urban ecohydrological model (UT&C v1.0) that is able to account for the effects of different plant types on the urban climate and hydrology, as well as the effects of the urban environment on plant well-being and performance. UT&C performs well when compared against energy flux measurements in three cities in different climates (Singapore, Melbourne, Phoenix) and can be used to assess urban climate mitigation strategies that aim at increasing or changing urban green cover.
Ashley M. Broadbent, Andrew M. Coutts, Kerry A. Nice, Matthias Demuzere, E. Scott Krayenhoff, Nigel J. Tapper, and Hendrik Wouters
Geosci. Model Dev., 12, 785–803, https://doi.org/10.5194/gmd-12-785-2019, https://doi.org/10.5194/gmd-12-785-2019, 2019
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We present a simple model for assessing the cooling impacts of vegetation and water features (green and blue infrastructure) in urban environments. This model is designed to be computationally efficient so that those without technical knowledge or access to high-performance computers can use it. TARGET can be used to model average street-level air temperature at canyon to block scales (e.g. 100 m resolution). The model is carefully designed to provide reliable and accurate cooling estimates.
Philipp A. Nauer, Eleonora Chiri, David de Souza, Lindsay B. Hutley, and Stefan K. Arndt
Biogeosciences, 15, 3731–3742, https://doi.org/10.5194/bg-15-3731-2018, https://doi.org/10.5194/bg-15-3731-2018, 2018
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Termites perform important biogeochemical processes in tropical ecosystems, but the complex structure of their mounds impede an accurate quantitative description. We present two novel low-cost field methods, based on photogrammetry and image analysis, to quantify the volume, surface area and porosities of termite mounds. The methods are accurate, rapid to apply and superior to traditional methods, and thus improve biogeochemical rate estimates such as greenhouse-gas fluxes from termite mounds.
Henrique Fürstenau Togashi, Iain Colin Prentice, Owen K. Atkin, Craig Macfarlane, Suzanne M. Prober, Keith J. Bloomfield, and Bradley John Evans
Biogeosciences, 15, 3461–3474, https://doi.org/10.5194/bg-15-3461-2018, https://doi.org/10.5194/bg-15-3461-2018, 2018
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Ecosystem models commonly assume that photosynthetic traits, such as carboxylation capacity measured at a standard temperature, are constant in time and therefore do not acclimate. Optimality hypotheses suggest this assumption may be incorrect. We investigated acclimation by carrying out measurements on woody species during distinct seasons in Western Australia. Our study shows evidence that carboxylation capacity should acclimate so that it increases somewhat with growth temperature.
Eva van Gorsel, James Cleverly, Jason Beringer, Helen Cleugh, Derek Eamus, Lindsay B. Hutley, Peter Isaac, and Suzanne Prober
Biogeosciences, 15, 349–352, https://doi.org/10.5194/bg-15-349-2018, https://doi.org/10.5194/bg-15-349-2018, 2018
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gabriel Abramowitz, Martin G. De Kauwe, Bradley Evans, Vanessa Haverd, Longhui Li, Caitlin Moore, Youngryel Ryu, Simon Scheiter, Stanislaus J. Schymanski, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 14, 4711–4732, https://doi.org/10.5194/bg-14-4711-2017, https://doi.org/10.5194/bg-14-4711-2017, 2017
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This paper attempts to review some of the current challenges faced by the modelling community in simulating the behaviour of savanna ecosystems. We provide a particular focus on three dynamic processes (phenology, root-water access, and fire) that are characteristic of savannas, which we believe are not adequately represented in current-generation terrestrial biosphere models. We highlight reasons for these misrepresentations, possible solutions and a future direction for research in this area.
Nina Hinko-Najera, Peter Isaac, Jason Beringer, Eva van Gorsel, Cacilia Ewenz, Ian McHugh, Jean-François Exbrayat, Stephen J. Livesley, and Stefan K. Arndt
Biogeosciences, 14, 3781–3800, https://doi.org/10.5194/bg-14-3781-2017, https://doi.org/10.5194/bg-14-3781-2017, 2017
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We undertook a 3-year study (2010–2012) of eddy covariance measurements in a dry temperate eucalypt (broadleaf evergreen) forest in southeastern Australia. The forest was a large and constant carbon sink, with the greatest uptake in early spring and summer. A strong seasonal pattern in environmental controls of daytime and night-time NEE was revealed. Our results show the potential of temperate eucalypt forests to sequester large amounts of carbon when not water limited.
Ian D. McHugh, Jason Beringer, Shaun C. Cunningham, Patrick J. Baker, Timothy R. Cavagnaro, Ralph Mac Nally, and Ross M. Thompson
Biogeosciences, 14, 3027–3050, https://doi.org/10.5194/bg-14-3027-2017, https://doi.org/10.5194/bg-14-3027-2017, 2017
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We analysed a 3-year record of CO2 exchange at a eucalypt woodland and found that substantial nocturnal advective CO2 losses occurred, thus requiring correction. We demonstrated that the most common of these correction methods incurred substantial bias in long-term estimates of carbon balance if storage of CO2 below the measurement height was excluded. This is important because the majority of sites both in Australia and internationally lack such measurements.
Peter Isaac, James Cleverly, Ian McHugh, Eva van Gorsel, Cacilia Ewenz, and Jason Beringer
Biogeosciences, 14, 2903–2928, https://doi.org/10.5194/bg-14-2903-2017, https://doi.org/10.5194/bg-14-2903-2017, 2017
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Networks of flux towers present diverse challenges to data collectors, managers and users. For data collectors, the goal is to minimise the time spent producing usable data sets. For data managers, the challenge is making data available in a timely and broad manner. For data users, the quest is for consistency in data processing across sites and networks. The OzFlux data path was developed to address these disparate needs and serves as an example of intra- and inter-network integration.
Jason Beringer, Ian McHugh, Lindsay B. Hutley, Peter Isaac, and Natascha Kljun
Biogeosciences, 14, 1457–1460, https://doi.org/10.5194/bg-14-1457-2017, https://doi.org/10.5194/bg-14-1457-2017, 2017
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Standardised, quality-controlled and robust data from flux networks underpin the understanding of ecosystem processes and tools to manage our natural resources. The Dynamic INtegrated Gap-filling and partitioning for OzFlux (DINGO) system enables gap-filling and partitioning of fluxes and subsequently provides diagnostics and results. Quality data from robust systems like DINGO ensure the utility and uptake of flux data and facilitates synergies between flux, remote sensing and modelling.
Tyler W. Davis, I. Colin Prentice, Benjamin D. Stocker, Rebecca T. Thomas, Rhys J. Whitley, Han Wang, Bradley J. Evans, Angela V. Gallego-Sala, Martin T. Sykes, and Wolfgang Cramer
Geosci. Model Dev., 10, 689–708, https://doi.org/10.5194/gmd-10-689-2017, https://doi.org/10.5194/gmd-10-689-2017, 2017
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This research presents a comprehensive description for calculating necessary, but sparsely observed, factors related to Earth's surface energy and water budgets relevant in, but not limited to, the study of ecosystems. We present the equations, including their derivations and assumptions, as well as example indicators relevant to plant-available moisture. The robustness of these relatively simple equations provides a tool to be used across broad fields of scientific research.
Cassandra Denise Wilks Rogers and Jason Beringer
Biogeosciences, 14, 597–615, https://doi.org/10.5194/bg-14-597-2017, https://doi.org/10.5194/bg-14-597-2017, 2017
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Savannas are extensive yet sensitive to variability in precipitation. We examined the relationship between climate phenomena and historical rainfall variability across Australian savannas using 16 climate indicies. Seasonal variation was most correlated with the Australian Monsoon Index, whereas interannual variability was related to a greater number of phenomena. Rainfall variability and the underlying climate processes driving variability are important.
Ning Dong, Iain Colin Prentice, Bradley J. Evans, Stefan Caddy-Retalic, Andrew J. Lowe, and Ian J. Wright
Biogeosciences, 14, 481–495, https://doi.org/10.5194/bg-14-481-2017, https://doi.org/10.5194/bg-14-481-2017, 2017
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The nitrogen content of leaves is a key quantity for understanding ecosystem function. We analysed variations in nitrogen per unit leaf area among species at sites along a transect across Australia including many climates and ecosystem types. The data could be explained by the idea that leaf nitrogen comprises two parts, one proportional to leaf mass, the other (metabolic) part proportional to light intensity and declining with CO2 drawdown and temperature, as optimal allocation theory predicts.
Mila Bristow, Lindsay B. Hutley, Jason Beringer, Stephen J. Livesley, Andrew C. Edwards, and Stefan K. Arndt
Biogeosciences, 13, 6285–6303, https://doi.org/10.5194/bg-13-6285-2016, https://doi.org/10.5194/bg-13-6285-2016, 2016
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Northern Australian savanna landscapes are a region earmarked for potential agricultural expansion. Greenhouse gas emissions from savanna land use change were quantified to determine the relative impact of increased rates of deforestation on Australia's national greenhouse gas accounts. Emissions from historic rates of deforestation were similar to savanna burning, but expanded clearing across northern Australia could add 3 % to Australia’s national greenhouse gas emissions.
Eva van Gorsel, Sebastian Wolf, James Cleverly, Peter Isaac, Vanessa Haverd, Cäcilia Ewenz, Stefan Arndt, Jason Beringer, Víctor Resco de Dios, Bradley J. Evans, Anne Griebel, Lindsay B. Hutley, Trevor Keenan, Natascha Kljun, Craig Macfarlane, Wayne S. Meyer, Ian McHugh, Elise Pendall, Suzanne M. Prober, and Richard Silberstein
Biogeosciences, 13, 5947–5964, https://doi.org/10.5194/bg-13-5947-2016, https://doi.org/10.5194/bg-13-5947-2016, 2016
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Temperature extremes are expected to become more prevalent in the future and understanding ecosystem response is crucial. We synthesised measurements and model results to investigate the effect of a summer heat wave on carbon and water exchange across three biogeographic regions in southern Australia. Forests proved relatively resilient to short-term heat extremes but the response of woodlands indicates that the carbon sinks of large areas of Australia may not be sustainable in a future climate.
Jason Beringer, Lindsay B. Hutley, Ian McHugh, Stefan K. Arndt, David Campbell, Helen A. Cleugh, James Cleverly, Víctor Resco de Dios, Derek Eamus, Bradley Evans, Cacilia Ewenz, Peter Grace, Anne Griebel, Vanessa Haverd, Nina Hinko-Najera, Alfredo Huete, Peter Isaac, Kasturi Kanniah, Ray Leuning, Michael J. Liddell, Craig Macfarlane, Wayne Meyer, Caitlin Moore, Elise Pendall, Alison Phillips, Rebecca L. Phillips, Suzanne M. Prober, Natalia Restrepo-Coupe, Susanna Rutledge, Ivan Schroder, Richard Silberstein, Patricia Southall, Mei Sun Yee, Nigel J. Tapper, Eva van Gorsel, Camilla Vote, Jeff Walker, and Tim Wardlaw
Biogeosciences, 13, 5895–5916, https://doi.org/10.5194/bg-13-5895-2016, https://doi.org/10.5194/bg-13-5895-2016, 2016
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OzFlux is the regional Australian and New Zealand flux tower network that aims to provide a continental-scale national facility to monitor and assess trends, and improve predictions, of Australia’s terrestrial biosphere and climate. We describe the evolution, design, and status as well as an overview of data processing. We suggest that a synergistic approach is required to address all of the spatial, ecological, human, and cultural challenges of managing Australian ecosystems.
Natalia Restrepo-Coupe, Alfredo Huete, Kevin Davies, James Cleverly, Jason Beringer, Derek Eamus, Eva van Gorsel, Lindsay B. Hutley, and Wayne S. Meyer
Biogeosciences, 13, 5587–5608, https://doi.org/10.5194/bg-13-5587-2016, https://doi.org/10.5194/bg-13-5587-2016, 2016
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We re-evaluated the connection between satellite greenness products and C-flux tower data in four Australian ecosystems. We identify key mechanisms driving the carbon cycle, and provide an ecological basis for the interpretation of vegetation indices. We found relationships between productivity and greenness to be non-significant in meteorologically driven evergreen forests and sites where climate and vegetation phenology were asynchronous, and highly correlated in phenology-driven ecosystems.
Caitlin E. Moore, Tim Brown, Trevor F. Keenan, Remko A. Duursma, Albert I. J. M. van Dijk, Jason Beringer, Darius Culvenor, Bradley Evans, Alfredo Huete, Lindsay B. Hutley, Stefan Maier, Natalia Restrepo-Coupe, Oliver Sonnentag, Alison Specht, Jeffrey R. Taylor, Eva van Gorsel, and Michael J. Liddell
Biogeosciences, 13, 5085–5102, https://doi.org/10.5194/bg-13-5085-2016, https://doi.org/10.5194/bg-13-5085-2016, 2016
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Australian vegetation phenology is highly variable due to the diversity of ecosystems on the continent. We explore continental-scale variability using satellite remote sensing by broadly classifying areas as seasonal, non-seasonal, or irregularly seasonal. We also examine ecosystem-scale phenology using phenocams and show that some broadly non-seasonal ecosystems do display phenological variability. Overall, phenocams are useful for understanding ecosystem-scale Australian vegetation phenology.
Rhys Whitley, Jason Beringer, Lindsay B. Hutley, Gab Abramowitz, Martin G. De Kauwe, Remko Duursma, Bradley Evans, Vanessa Haverd, Longhui Li, Youngryel Ryu, Benjamin Smith, Ying-Ping Wang, Mathew Williams, and Qiang Yu
Biogeosciences, 13, 3245–3265, https://doi.org/10.5194/bg-13-3245-2016, https://doi.org/10.5194/bg-13-3245-2016, 2016
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In this study we assess how well terrestrial biosphere models perform at predicting water and carbon cycling for savanna ecosystems. We apply our models to five savanna sites in Northern Australia and highlight key causes for model failure. Our assessment of model performance uses a novel benchmarking system that scores a model’s predictive ability based on how well it is utilizing its driving information. On average, we found the models as a group display only moderate levels of performance.
Caitlin E. Moore, Jason Beringer, Bradley Evans, Lindsay B. Hutley, Ian McHugh, and Nigel J. Tapper
Biogeosciences, 13, 2387–2403, https://doi.org/10.5194/bg-13-2387-2016, https://doi.org/10.5194/bg-13-2387-2016, 2016
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Savannas cover 20 % of the global land surface and account for 25 % of global terrestrial carbon uptake. They support 20 % of the world’s human population and are one of the most important ecosystems on our planet. We evaluated the temporal partitioning of carbon between overstory and understory in Australian tropical savanna using eddy covariance. We found the understory contributed ~ 32 % to annual productivity, increasing to 40 % in the wet season, thus driving seasonality in carbon uptake.
V. Haverd, B. Smith, M. Raupach, P. Briggs, L. Nieradzik, J. Beringer, L. Hutley, C. M. Trudinger, and J. Cleverly
Biogeosciences, 13, 761–779, https://doi.org/10.5194/bg-13-761-2016, https://doi.org/10.5194/bg-13-761-2016, 2016
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We present a new approach for modelling coupled phenology and carbon allocation in savannas, and test it using data from the OzFlux network. Model behaviour emerges from complex feedbacks between the plant physiology and vegetation dynamics, in response to resource availability, and not from imposed hypotheses about the controls on tree-grass co-existence. Results indicate that resource limitation is a stronger determinant of tree cover than disturbance in Australian savannas.
C. Werner, K. Reiser, M. Dannenmann, L. B. Hutley, J. Jacobeit, and K. Butterbach-Bahl
Biogeosciences, 11, 6047–6065, https://doi.org/10.5194/bg-11-6047-2014, https://doi.org/10.5194/bg-11-6047-2014, 2014
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Atmospheric loss of N from savanna soil was dominated by N2 emissions (82-99% of total N loss to atmosphere). Nitric oxide emissions significantly contributed at 50% WFPS; high temperatures and N2O emissions were negligible. Based on a simple upscale approach we estimated annual loss of N to the atmosphere at 7.5kg yr-1. N2O emission was low for most samples, but high for a small subset of cores at 75% WFPS (due to short periods where such conditions occur this has little effect on totals).
H. Jamali, S. J. Livesley, L. B. Hutley, B. Fest, and S. K. Arndt
Biogeosciences, 10, 2229–2240, https://doi.org/10.5194/bg-10-2229-2013, https://doi.org/10.5194/bg-10-2229-2013, 2013
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Bonaventure Ntirugulirwa, Etienne Zibera, Nkuba Epaphrodite, Aloysie Manishimwe, Donat Nsabimana, Johan Uddling, and Göran Wallin
Biogeosciences, 20, 5125–5149, https://doi.org/10.5194/bg-20-5125-2023, https://doi.org/10.5194/bg-20-5125-2023, 2023
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Philippe Choler
Biogeosciences, 20, 4259–4272, https://doi.org/10.5194/bg-20-4259-2023, https://doi.org/10.5194/bg-20-4259-2023, 2023
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The year 2022 was unique in that the summer heat wave and drought led to a widespread reduction in vegetation growth at high elevation in the European Alps. This impact was unprecedented in the southwestern, warm, and dry part of the Alps. Over the last 2 decades, water has become a co-dominant control of vegetation activity in areas that were, so far, primarily controlled by temperature, and the growth of mountain grasslands has become increasingly sensitive to moisture availability.
Adriana Simonetti, Raquel Fernandes Araujo, Carlos Henrique Souza Celes, Flávia Ranara da Silva e Silva, Joaquim dos Santos, Niro Higuchi, Susan Trumbore, and Daniel Magnabosco Marra
Biogeosciences, 20, 3651–3666, https://doi.org/10.5194/bg-20-3651-2023, https://doi.org/10.5194/bg-20-3651-2023, 2023
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We combined 2 years of monthly drone-acquired RGB (red–green–blue) imagery with field surveys in a central Amazon forest. Our results indicate that small gaps associated with branch fall were the most frequent. Biomass losses were partially controlled by gap area, with branch fall and snapping contributing the least and greatest relative values, respectively. Our study highlights the potential of drone images for monitoring canopy dynamics in dense tropical forests.
Fredrik Lagergren, Robert G. Björk, Camilla Andersson, Danijel Belušić, Mats P. Björkman, Erik Kjellström, Petter Lind, David Lindstedt, Tinja Olenius, Håkan Pleijel, Gunhild Rosqvist, and Paul A. Miller
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-148, https://doi.org/10.5194/bg-2023-148, 2023
Revised manuscript accepted for BG
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The Fennoscandian boreal and mountain regions harbour a wide range of ecosystems sensitive to climate change. A new, highly resolved high-emission climate scenario enabled modelling of the vegetation development in this region at high resolution for the 21st century. The results show dramatic south to north and low to high altitude shifts of vegetation zones, especially for the open tundra environments, that will have large impli-cations for nature conservation, reindeer husbandry and forestry.
Silvia Caldararu, Victor Rolo, Benjamin D. Stocker, Teresa E. Gimeno, and Richard Nair
Biogeosciences, 20, 3637–3649, https://doi.org/10.5194/bg-20-3637-2023, https://doi.org/10.5194/bg-20-3637-2023, 2023
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Ecosystem manipulative experiments are large experiments in real ecosystems. They include processes such as species interactions and weather that would be omitted in more controlled settings. They offer a high level of realism but are underused in combination with vegetation models used to predict the response of ecosystems to global change. We propose a workflow using models and ecosystem experiments together, taking advantage of the benefits of both tools for Earth system understanding.
Katharina Ramskogler, Bettina Knoflach, Bernhard Elsner, Brigitta Erschbamer, Florian Haas, Tobias Heckmann, Florentin Hofmeister, Livia Piermattei, Camillo Ressl, Svenja Trautmann, Michael H. Wimmer, Clemens Geitner, Johann Stötter, and Erich Tasser
Biogeosciences, 20, 2919–2939, https://doi.org/10.5194/bg-20-2919-2023, https://doi.org/10.5194/bg-20-2919-2023, 2023
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Primary succession in proglacial areas depends on complex driving forces. To concretise the complex effects and interaction processes, 39 known explanatory variables assigned to seven spheres were analysed via principal component analysis and generalised additive models. Key results show that in addition to time- and elevation-dependent factors, also disturbances alter vegetation development. The results are useful for debates on vegetation development in a warming climate.
Zijing Li, Zhiyong Li, Xuze Tong, Lei Dong, Ying Zheng, Jinghui Zhang, Bailing Miao, Lixin Wang, Liqing Zhao, Lu Wen, Guodong Han, Frank Yonghong Li, and Cunzhu Liang
Biogeosciences, 20, 2869–2882, https://doi.org/10.5194/bg-20-2869-2023, https://doi.org/10.5194/bg-20-2869-2023, 2023
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We used random forest models and structural equation models to assess the relative importance of the present climate and paleoclimate as determinants of diversity and aboveground biomass. Results showed that paleoclimate changes and modern climate jointly determined contemporary biodiversity patterns, while community biomass was mainly affected by modern climate. These findings suggest that contemporary biodiversity patterns may be affected by processes at divergent temporal scales.
Florian Zellweger, Eric Sulmoni, Johanna T. Malle, Andri Baltensweiler, Tobias Jonas, Niklaus E. Zimmermann, Christian Ginzler, Dirk N. Karger, Pieter De Frenne, David Frey, and Clare Webster
EGUsphere, https://doi.org/10.5194/egusphere-2023-1549, https://doi.org/10.5194/egusphere-2023-1549, 2023
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The microclimatic conditions experienced by organisms living close to the ground are not well represented in currently used climate datasets derived from weather stations. Therefore, we measured and mapped ground microclimate temperatures at 10 meter spatial resolution across Switzerland, using a novel radiation model. Our results reveal a high variability in microclimates across different habitats and will help to better understand climate and land use impacts on biodiversity and ecosystems.
William Rupert Moore Flynn, Harry Jon Foord Owen, Stuart William David Grieve, and Emily Rebecca Lines
Biogeosciences, 20, 2769–2784, https://doi.org/10.5194/bg-20-2769-2023, https://doi.org/10.5194/bg-20-2769-2023, 2023
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Quantifying vegetation indices is crucial for ecosystem monitoring and modelling. Terrestrial laser scanning (TLS) has potential to accurately measure vegetation indices, but multiple methods exist, with little consensus on best practice. We compare three methods and extract wood-to-plant ratio, a metric used to correct for wood in leaf indices. We show corrective metrics vary with tree structure and variation among methods, highlighting the value of TLS data and importance of rigorous testing.
Haiyang Shi, Geping Luo, Olaf Hellwich, Alishir Kurban, Philippe De Maeyer, and Tim Van de Voorde
Biogeosciences, 20, 2727–2741, https://doi.org/10.5194/bg-20-2727-2023, https://doi.org/10.5194/bg-20-2727-2023, 2023
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In studies on the relationship between ecosystem functions and climate and plant traits, previously used data-driven methods such as multiple regression and random forest may be inadequate for representing causality due to limitations such as covariance between variables. Based on FLUXNET site data, we used a causal graphical model to revisit the control of climate and vegetation traits over ecosystem functions.
Josué Delgado-Balbuena, Henry W. Loescher, Carlos A. Aguirre-Gutiérrez, Teresa Alfaro-Reyna, Luis F. Pineda-Martínez, Rodrigo Vargas, and Tulio Arredondo
Biogeosciences, 20, 2369–2385, https://doi.org/10.5194/bg-20-2369-2023, https://doi.org/10.5194/bg-20-2369-2023, 2023
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In the semiarid grassland, an increase in soil moisture at shallow depths instantly enhances carbon release through respiration. In contrast, deeper soil water controls plant carbon uptake but with a delay of several days. Previous soil conditions, biological activity, and the size and timing of precipitation are factors that determine the amount of carbon released into the atmosphere. Thus, future changes in precipitation patterns could convert ecosystems from carbon sinks to carbon sources.
German Vargas Gutiérrez, Daniel Pérez-Aviles, Nanette Raczka, Damaris Pereira-Arias, Julián Tijerín-Triviño, L. David Pereira-Arias, David Medvigy, Bonnie G. Waring, Ember Morrisey, Edward Brzostek, and Jennifer S. Powers
Biogeosciences, 20, 2143–2160, https://doi.org/10.5194/bg-20-2143-2023, https://doi.org/10.5194/bg-20-2143-2023, 2023
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To study whether nutrient availability controls tropical dry forest responses to reductions in soil moisture, we established the first troughfall exclusion experiment in a tropical dry forest plantation system crossed with a fertilization scheme. We found that the effects of fertilization on net primary productivity are larger than the effects of a ~15 % reduction in soil moisture, although in many cases we observed an interaction between drought and nutrient additions, suggesting colimitation.
Alina Lucia Ludat and Simon Kübler
Biogeosciences, 20, 1991–2012, https://doi.org/10.5194/bg-20-1991-2023, https://doi.org/10.5194/bg-20-1991-2023, 2023
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Satellite-based analysis illustrates the impact of geological processes for the stability of the ecosystem in the Mara River basin (Kenya/Tanzania). Newly detected fault activity influences the course of river networks and modifies erosion–deposition patterns. Tectonic surface features and variations in rock chemistry lead to localized enhancement of clay and soil moisture values and seasonally stabilised vegetation growth patterns in this climatically vulnerable region.
Christian H. Mohr, Michael Dietze, Violeta Tolorza, Erwin Gonzalez, Benjamin Sotomayor, Andres Iroume, Sten Gilfert, and Frieder Tautz
EGUsphere, https://doi.org/10.5194/egusphere-2023-789, https://doi.org/10.5194/egusphere-2023-789, 2023
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Coastal temperate rainforests are underrepresented in the Critical Zone Observatory (CZO) catalogue, despite their outstanding ecological role. Here, we introduce the Pumalín CZO within the Patagonian Rainforest to explore carbon sink functioning, landscape evolution, matter and energy fluxes, and disturbance understanding using environmental seismology. First results highlight the Patagonian rainforest as particularly biomass rich and confirms the suitability of our blend of sensing techniques.
Erica Jaakkola, Antje Gärtner, Anna Maria Jönsson, Karl Ljung, Per-Ola Olsson, and Thomas Holst
Biogeosciences, 20, 803–826, https://doi.org/10.5194/bg-20-803-2023, https://doi.org/10.5194/bg-20-803-2023, 2023
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Increased spruce bark beetle outbreaks were recently seen in Sweden. When Norway spruce trees are attacked, they increase their production of VOCs, attempting to kill the beetles. We provide new insights into how the Norway spruce act when infested and found the emitted volatiles to increase up to 700 times and saw a change in compound blend. We estimate that the 2020 bark beetle outbreak in Sweden could have increased the total monoterpene emissions from the forest by more than 10 %.
Georg Wohlfahrt, Albin Hammerle, Felix M. Spielmann, Florian Kitz, and Chuixiang Yi
Biogeosciences, 20, 589–596, https://doi.org/10.5194/bg-20-589-2023, https://doi.org/10.5194/bg-20-589-2023, 2023
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The trace gas carbonyl sulfide (COS), which is taken up by plant leaves in a process very similar to photosynthesis, is thought to be a promising proxy for the gross uptake of carbon dioxide by plants. Here we propose a new framework for estimating a key metric to that end, the so-called leaf relative uptake rate. The values we deduce by applying principles of plant optimality are considerably lower than published values and may help reduce the uncertainty of the global COS budget.
François Jonard, Andrew F. Feldman, Daniel J. Short Gianotti, and Dara Entekhabi
Biogeosciences, 19, 5575–5590, https://doi.org/10.5194/bg-19-5575-2022, https://doi.org/10.5194/bg-19-5575-2022, 2022
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We investigate the spatial and temporal patterns of light and water limitation in plant function at the ecosystem scale. Using satellite observations, we characterize the nonlinear relationships between sun-induced chlorophyll fluorescence (SIF) and water and light availability. This study highlights that soil moisture limitations on SIF are found primarily in drier environments, while light limitations are found in intermediately wet regions.
Nikolai Knapp, Sabine Attinger, and Andreas Huth
Biogeosciences, 19, 4929–4944, https://doi.org/10.5194/bg-19-4929-2022, https://doi.org/10.5194/bg-19-4929-2022, 2022
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The biomass of forests is determined by forest growth and mortality. These quantities can be estimated with different methods such as inventories, remote sensing and modeling. These methods are usually being applied at different spatial scales. The scales influence the obtained frequency distributions of biomass, growth and mortality. This study suggests how to transfer between scales, when using forest models of different complexity for a tropical forest.
Kai Chen, Kevin S. Burgess, Fangliang He, Xiang-Yun Yang, Lian-Ming Gao, and De-Zhu Li
Biogeosciences, 19, 4801–4810, https://doi.org/10.5194/bg-19-4801-2022, https://doi.org/10.5194/bg-19-4801-2022, 2022
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Why does plants' distributional range size vary enormously? This study provides evidence that seed mass, intraspecific seed mass variation, seed dispersal mode and phylogeny contribute to explaining species distribution variation on a geographic scale. Our study clearly shows the importance of including seed life-history traits in modeling and predicting the impact of climate change on species distribution of seed plants.
Ying Ying Chen, Huan Yang, Gen Sheng Bao, Xiao Pan Pang, and Zheng Gang Guo
Biogeosciences, 19, 4521–4532, https://doi.org/10.5194/bg-19-4521-2022, https://doi.org/10.5194/bg-19-4521-2022, 2022
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Investigating the effect of the presence of plateau pikas on ecosystem services of alpine meadows is helpful to understand the role of the presence of small mammalian herbivores in grasslands. The results of this study showed that the presence of plateau pikas led to higher biodiversity conservation, soil nitrogen and phosphorus maintenance, and carbon sequestration of alpine meadows, whereas it led to lower forage available to livestock and water conservation of alpine meadows.
Clement Jean Frédéric Delcourt and Sander Veraverbeke
Biogeosciences, 19, 4499–4520, https://doi.org/10.5194/bg-19-4499-2022, https://doi.org/10.5194/bg-19-4499-2022, 2022
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This study provides new equations that can be used to estimate aboveground tree biomass in larch-dominated forests of northeast Siberia. Applying these equations to 53 forest stands in the Republic of Sakha (Russia) resulted in significantly larger biomass stocks than when using existing equations. The data presented in this work can help refine biomass estimates in Siberian boreal forests. This is essential to assess changes in boreal vegetation and carbon dynamics.
Iris Johanna Aalto, Eduardo Eiji Maeda, Janne Heiskanen, Eljas Kullervo Aalto, and Petri Kauko Emil Pellikka
Biogeosciences, 19, 4227–4247, https://doi.org/10.5194/bg-19-4227-2022, https://doi.org/10.5194/bg-19-4227-2022, 2022
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Tree canopies are strong moderators of understory climatic conditions. In tropical areas, trees cool down the microclimates. Using remote sensing and field measurements we show how even intermediate canopy cover and agroforestry trees contributed to buffering the hottest temperatures in Kenya. The cooling effect was the greatest during hot days and in lowland areas, where the ambient temperatures were high. Adopting agroforestry practices in the area could assist in mitigating climate change.
Jing Wang and Xuefa Wen
Biogeosciences, 19, 4197–4208, https://doi.org/10.5194/bg-19-4197-2022, https://doi.org/10.5194/bg-19-4197-2022, 2022
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Excess radiation and low temperatures exacerbate drought impacts on canopy conductance (Gs) among transects. The primary determinant of drought stress on Gs was soil moisture on the Loess Plateau (LP) and the Mongolian Plateau (MP), whereas it was the vapor pressure deficit on the Tibetan Plateau (TP). Radiation exhibited a negative effect on Gs via drought stress within transects, while temperature had negative effects on stomatal conductance on the TP but no effect on the LP and MP.
Sylvain Monteux, Janine Mariën, and Eveline J. Krab
Biogeosciences, 19, 4089–4105, https://doi.org/10.5194/bg-19-4089-2022, https://doi.org/10.5194/bg-19-4089-2022, 2022
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Quantifying the feedback from the decomposition of thawing permafrost soils is crucial to establish adequate climate warming mitigation scenarios. Past efforts have focused on abiotic and to some extent microbial drivers of decomposition but not biotic drivers such as soil fauna. We added soil fauna (Collembola Folsomia candida) to permafrost, which introduced bacterial taxa without affecting bacterial communities as a whole but increased CO2 production (+12 %), presumably due to priming.
Mirjam Pfeiffer, Munir P. Hoffmann, Simon Scheiter, William Nelson, Johannes Isselstein, Kingsley Ayisi, Jude J. Odhiambo, and Reimund Rötter
Biogeosciences, 19, 3935–3958, https://doi.org/10.5194/bg-19-3935-2022, https://doi.org/10.5194/bg-19-3935-2022, 2022
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Smallholder farmers face challenges due to poor land management and climate change. We linked the APSIM crop model and the aDGVM2 vegetation model to investigate integrated management options that enhance ecosystem functions and services. Sustainable intensification moderately increased yields. Crop residue grazing reduced feed gaps but not for dry-to-wet season transitions. Measures to improve soil water and nutrient status are recommended. Landscape-level ecosystem management is essential.
Marina Corrêa Scalon, Imma Oliveras Menor, Renata Freitag, Karine S. Peixoto, Sami W. Rifai, Beatriz Schwantes Marimon, Ben Hur Marimon Junior, and Yadvinder Malhi
Biogeosciences, 19, 3649–3661, https://doi.org/10.5194/bg-19-3649-2022, https://doi.org/10.5194/bg-19-3649-2022, 2022
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We investigated dynamic nutrient flow and demand in a typical savanna and a transition forest to understand how similar soils and the same climate dominated by savanna vegetation can also support forest-like formations. Savanna relied on nutrient resorption from wood, and nutrient demand was equally partitioned between leaves, wood and fine roots. Transition forest relied on resorption from the canopy biomass and nutrient demand was predominantly driven by leaves.
Emma Bousquet, Arnaud Mialon, Nemesio Rodriguez-Fernandez, Stéphane Mermoz, and Yann Kerr
Biogeosciences, 19, 3317–3336, https://doi.org/10.5194/bg-19-3317-2022, https://doi.org/10.5194/bg-19-3317-2022, 2022
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Pre- and post-fire values of four climate variables and four vegetation variables were analysed at the global scale, in order to observe (i) the general fire likelihood factors and (ii) the vegetation recovery trends over various biomes. The main result of this study is that L-band vegetation optical depth (L-VOD) is the most impacted vegetation variable and takes the longest to recover over dense forests. L-VOD could then be useful for post-fire vegetation recovery studies.
Chen Yang, Yue Shi, Wenjuan Sun, Jiangling Zhu, Chengjun Ji, Yuhao Feng, Suhui Ma, Zhaodi Guo, and Jingyun Fang
Biogeosciences, 19, 2989–2999, https://doi.org/10.5194/bg-19-2989-2022, https://doi.org/10.5194/bg-19-2989-2022, 2022
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Quantifying China's forest biomass C pool is important in understanding C cycling in forests. However, most of studies on forest biomass C pool were limited to the period of 2004–2008. Here, we used a biomass expansion factor method to estimate C pool from 1977 to 2018. The results suggest that afforestation practices, forest growth, and environmental changes were the main drivers of increased C sink. Thus, this study provided an essential basis for achieving China's C neutrality target.
Anne Schucknecht, Bumsuk Seo, Alexander Krämer, Sarah Asam, Clement Atzberger, and Ralf Kiese
Biogeosciences, 19, 2699–2727, https://doi.org/10.5194/bg-19-2699-2022, https://doi.org/10.5194/bg-19-2699-2022, 2022
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Actual maps of grassland traits could improve local farm management and support environmental assessments. We developed, assessed, and applied models to estimate dry biomass and plant nitrogen (N) concentration in pre-Alpine grasslands with drone-based multispectral data and canopy height information. Our results indicate that machine learning algorithms are able to estimate both parameters but reach a better level of performance for biomass.
Ramona J. Heim, Andrey Yurtaev, Anna Bucharova, Wieland Heim, Valeriya Kutskir, Klaus-Holger Knorr, Christian Lampei, Alexandr Pechkin, Dora Schilling, Farid Sulkarnaev, and Norbert Hölzel
Biogeosciences, 19, 2729–2740, https://doi.org/10.5194/bg-19-2729-2022, https://doi.org/10.5194/bg-19-2729-2022, 2022
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Fires will probably increase in Arctic regions due to climate change. Yet, the long-term effects of tundra fires on carbon (C) and nitrogen (N) stocks and cycling are still unclear. We investigated the long-term fire effects on C and N stocks and cycling in soil and aboveground living biomass.
We found that tundra fires did not affect total C and N stocks because a major part of the stocks was located belowground in soils which were largely unaltered by fire.
Aileen B. Baird, Edward J. Bannister, A. Robert MacKenzie, and Francis D. Pope
Biogeosciences, 19, 2653–2669, https://doi.org/10.5194/bg-19-2653-2022, https://doi.org/10.5194/bg-19-2653-2022, 2022
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Forest environments contain a wide variety of airborne biological particles (bioaerosols) important for plant and animal health and biosphere–atmosphere interactions. Using low-cost sensors and a free-air carbon dioxide enrichment (FACE) experiment, we monitor the impact of enhanced CO2 on airborne particles. No effect of the enhanced CO2 treatment on total particle concentrations was observed, but a potential suppression of high concentration bioaerosol events was detected under enhanced CO2.
Melanie S. Verlinden, Hamada AbdElgawad, Arne Ven, Lore T. Verryckt, Sebastian Wieneke, Ivan A. Janssens, and Sara Vicca
Biogeosciences, 19, 2353–2364, https://doi.org/10.5194/bg-19-2353-2022, https://doi.org/10.5194/bg-19-2353-2022, 2022
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Zea mays grows in mesocosms with different soil nutrition levels. At low phosphorus (P) availability, leaf physiological activity initially decreased strongly. P stress decreased over the season. Arbuscular mycorrhizal fungi (AMF) symbiosis increased over the season. AMF symbiosis is most likely responsible for gradual reduction in P stress.
Guoyu Lan, Bangqian Chen, Chuan Yang, Rui Sun, Zhixiang Wu, and Xicai Zhang
Biogeosciences, 19, 1995–2005, https://doi.org/10.5194/bg-19-1995-2022, https://doi.org/10.5194/bg-19-1995-2022, 2022
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Little is known about the impact of rubber plantations on diversity of the Great Mekong Subregion. In this study, we uncovered latitudinal gradients of plant diversity of rubber plantations. Exotic species with high dominance result in loss of plant diversity of rubber plantations. Not all exotic species would reduce plant diversity of rubber plantations. Much more effort should be made to balance agricultural production with conservation goals in this region.
Ulrike Hiltner, Andreas Huth, and Rico Fischer
Biogeosciences, 19, 1891–1911, https://doi.org/10.5194/bg-19-1891-2022, https://doi.org/10.5194/bg-19-1891-2022, 2022
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Quantifying biomass loss rates due to stem mortality is important for estimating the role of tropical forests in the global carbon cycle. We analyse the consequences of long-term elevated stem mortality for tropical forest dynamics and biomass loss. Based on simulations, we developed a statistical model to estimate biomass loss rates of forests in different successional states from forest attributes. Assuming a doubling of tree mortality, biomass loss increased from 3.2 % yr-1 to 4.5 % yr-1.
Jon Cranko Page, Martin G. De Kauwe, Gab Abramowitz, Jamie Cleverly, Nina Hinko-Najera, Mark J. Hovenden, Yao Liu, Andy J. Pitman, and Kiona Ogle
Biogeosciences, 19, 1913–1932, https://doi.org/10.5194/bg-19-1913-2022, https://doi.org/10.5194/bg-19-1913-2022, 2022
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Although vegetation responds to climate at a wide range of timescales, models of the land carbon sink often ignore responses that do not occur instantly. In this study, we explore the timescales at which Australian ecosystems respond to climate. We identified that carbon and water fluxes can be modelled more accurately if we include environmental drivers from up to a year in the past. The importance of antecedent conditions is related to ecosystem aridity but is also influenced by other factors.
Qing Sun, Valentin H. Klaus, Raphaël Wittwer, Yujie Liu, Marcel G. A. van der Heijden, Anna K. Gilgen, and Nina Buchmann
Biogeosciences, 19, 1853–1869, https://doi.org/10.5194/bg-19-1853-2022, https://doi.org/10.5194/bg-19-1853-2022, 2022
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Drought is one of the biggest challenges for future food production globally. During a simulated drought, pea and barley mainly relied on water from shallow soil depths, independent of different cropping systems.
David Kienle, Anna Walentowitz, Leyla Sungur, Alessandro Chiarucci, Severin D. H. Irl, Anke Jentsch, Ole R. Vetaas, Richard Field, and Carl Beierkuhnlein
Biogeosciences, 19, 1691–1703, https://doi.org/10.5194/bg-19-1691-2022, https://doi.org/10.5194/bg-19-1691-2022, 2022
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Volcanic islands consist mainly of basaltic rocks. Additionally, there are often occurrences of small phonolite rocks differing in color and surface. On La Palma (Canary Islands), phonolites appear to be more suitable for plants than the omnipresent basalts. Therefore, we expected phonolites to be species-rich with larger plant individuals compared to the surrounding basaltic areas. Indeed, as expected, we found more species on phonolites and larger plant individuals in general.
Vera Porwollik, Susanne Rolinski, Jens Heinke, Werner von Bloh, Sibyll Schaphoff, and Christoph Müller
Biogeosciences, 19, 957–977, https://doi.org/10.5194/bg-19-957-2022, https://doi.org/10.5194/bg-19-957-2022, 2022
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The study assesses impacts of grass cover crop cultivation on cropland during main-crop off-season periods applying the global vegetation model LPJmL (V.5.0-tillage-cc). Compared to simulated bare-soil fallowing practices, cover crops led to increased soil carbon content and reduced nitrogen leaching rates on the majority of global cropland. Yield responses of main crops following cover crops vary with location, duration of altered management, crop type, water regime, and tillage practice.
Tzu-Hsuan Tu, Li-Ling Chen, Yi-Ping Chiu, Li-Hung Lin, Li-Wei Wu, Francesco Italiano, J. Bruce H. Shyu, Seyed Naser Raisossadat, and Pei-Ling Wang
Biogeosciences, 19, 831–843, https://doi.org/10.5194/bg-19-831-2022, https://doi.org/10.5194/bg-19-831-2022, 2022
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This investigation of microbial biogeography in terrestrial mud volcanoes (MVs) covers study sites over a geographic distance of up to 10 000 km across the Eurasian continent. It compares microbial community compositions' coupling with geochemical data across a 3D space. We demonstrate that stochastic processes operating at continental scales and environmental filtering at local scales drive the formation of patchy habitats and the pattern of diversification for microbes in terrestrial MVs.
Sami W. Rifai, Martin G. De Kauwe, Anna M. Ukkola, Lucas A. Cernusak, Patrick Meir, Belinda E. Medlyn, and Andy J. Pitman
Biogeosciences, 19, 491–515, https://doi.org/10.5194/bg-19-491-2022, https://doi.org/10.5194/bg-19-491-2022, 2022
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Australia's woody ecosystems have experienced widespread greening despite a warming climate and repeated record-breaking droughts and heat waves. Increasing atmospheric CO2 increases plant water use efficiency, yet quantifying the CO2 effect is complicated due to co-occurring effects of global change. Here we harmonized a 38-year satellite record to separate the effects of climate change, land use change, and disturbance to quantify the CO2 fertilization effect on the greening phenomenon.
Renée Hermans, Rebecca McKenzie, Roxane Andersen, Yit Arn Teh, Neil Cowie, and Jens-Arne Subke
Biogeosciences, 19, 313–327, https://doi.org/10.5194/bg-19-313-2022, https://doi.org/10.5194/bg-19-313-2022, 2022
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Peatlands are a significant global carbon store, which can be compromised by drainage and afforestation. We measured the peat decomposition under a 30-year-old drained forest plantation: 115 ± 16 g C m−2 yr−1, ca. 40 % of total soil respiration. Considering input of litter from trees, our results indicate that the soils in these 30-year-old drained and afforested peatlands are a net sink for C, since substantially more C enters the soil as organic matter than is decomposed heterotrophically.
Kai Tang, Beatriz Sánchez-Parra, Petya Yordanova, Jörn Wehking, Anna T. Backes, Daniel A. Pickersgill, Stefanie Maier, Jean Sciare, Ulrich Pöschl, Bettina Weber, and Janine Fröhlich-Nowoisky
Biogeosciences, 19, 71–91, https://doi.org/10.5194/bg-19-71-2022, https://doi.org/10.5194/bg-19-71-2022, 2022
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Metagenomic sequencing and freezing experiments of aerosol samples collected on Cyprus revealed rain-related short-term changes of bioaerosol and ice nuclei composition. Filtration experiments showed a rain-related enhancement of biological ice nuclei > 5 µm and < 0.1 µm. The observed effects of rainfall on the composition of atmospheric bioaerosols and ice nuclei may influence the hydrological cycle as well as the health effects of air particulate matter (pathogens, allergens).
Raquel Fernandes Araujo, Samuel Grubinger, Carlos Henrique Souza Celes, Robinson I. Negrón-Juárez, Milton Garcia, Jonathan P. Dandois, and Helene C. Muller-Landau
Biogeosciences, 18, 6517–6531, https://doi.org/10.5194/bg-18-6517-2021, https://doi.org/10.5194/bg-18-6517-2021, 2021
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Our study contributed to improving the understanding of temporal variation and climate correlates of canopy disturbances mainly caused by treefalls and branchfalls. We used a unique dataset of 5 years of approximately monthly drone-acquired RGB (red–green–blue) imagery for 50 ha of mature tropical forest on Barro Colorado Island, Panama. We found that canopy disturbance rates were highly temporally variable, were higher in the wet season, and were related to extreme rainfall events.
Adrian Gustafson, Paul A. Miller, Robert G. Björk, Stefan Olin, and Benjamin Smith
Biogeosciences, 18, 6329–6347, https://doi.org/10.5194/bg-18-6329-2021, https://doi.org/10.5194/bg-18-6329-2021, 2021
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We performed model simulations of vegetation change for a historic period and a range of climate change scenarios at a high spatial resolution. Projected treeline advance continued at the same or increased rates compared to our historic simulation. Temperature isotherms advanced faster than treelines, revealing a lag in potential vegetation shifts that was modulated by nitrogen availability. At the year 2100 projected treelines had advanced by 45–195 elevational metres depending on the scenario.
Marc Wehrhan, Daniel Puppe, Danuta Kaczorek, and Michael Sommer
Biogeosciences, 18, 5163–5183, https://doi.org/10.5194/bg-18-5163-2021, https://doi.org/10.5194/bg-18-5163-2021, 2021
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UAS remote sensing provides a promising tool for new insights into Si biogeochemistry at catchment scale. Our study on an artificial catchment shows surprisingly high silicon stocks in the biomass of two grass species (C. epigejos, 7 g m−2; P. australis, 27 g m−2). The distribution of initial sediment properties (clay, Tiron-extractable Si, nitrogen, plant-available potassium) controlled the spatial distribution of C. epigejos. Soil wetness determined the occurrence of P. australis.
Vojtěch Abraham, Sheila Hicks, Helena Svobodová-Svitavská, Elissaveta Bozilova, Sampson Panajiotidis, Mariana Filipova-Marinova, Christin Eldegard Jensen, Spassimir Tonkov, Irena Agnieszka Pidek, Joanna Święta-Musznicka, Marcelina Zimny, Eliso Kvavadze, Anna Filbrandt-Czaja, Martina Hättestrand, Nurgül Karlıoğlu Kılıç, Jana Kosenko, Maria Nosova, Elena Severova, Olga Volkova, Margrét Hallsdóttir, Laimdota Kalniņa, Agnieszka M. Noryśkiewicz, Bożena Noryśkiewicz, Heather Pardoe, Areti Christodoulou, Tiiu Koff, Sonia L. Fontana, Teija Alenius, Elisabeth Isaksson, Heikki Seppä, Siim Veski, Anna Pędziszewska, Martin Weiser, and Thomas Giesecke
Biogeosciences, 18, 4511–4534, https://doi.org/10.5194/bg-18-4511-2021, https://doi.org/10.5194/bg-18-4511-2021, 2021
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We present a continental dataset of pollen accumulation rates (PARs) collected by pollen traps. This absolute measure of pollen rain (grains cm−2 yr−1) has a positive relationship to current vegetation and latitude. Trap and fossil PARs have similar values within one region, so it opens up possibilities for using fossil PARs to reconstruct past changes in plant biomass and primary productivity. The dataset is available in the Neotoma Paleoecology Database.
Polly C. Buotte, Charles D. Koven, Chonggang Xu, Jacquelyn K. Shuman, Michael L. Goulden, Samuel Levis, Jessica Katz, Junyan Ding, Wu Ma, Zachary Robbins, and Lara M. Kueppers
Biogeosciences, 18, 4473–4490, https://doi.org/10.5194/bg-18-4473-2021, https://doi.org/10.5194/bg-18-4473-2021, 2021
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We present an approach for ensuring the definitions of plant types in dynamic vegetation models are connected to the underlying ecological processes controlling community composition. Our approach can be applied regionally or globally. Robust resolution of community composition will allow us to use these models to address important questions related to future climate and management effects on plant community composition, structure, carbon storage, and feedbacks within the Earth system.
Thomas Janssen, Ype van der Velde, Florian Hofhansl, Sebastiaan Luyssaert, Kim Naudts, Bart Driessen, Katrin Fleischer, and Han Dolman
Biogeosciences, 18, 4445–4472, https://doi.org/10.5194/bg-18-4445-2021, https://doi.org/10.5194/bg-18-4445-2021, 2021
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Satellite images show that the Amazon forest has greened up during past droughts. Measurements of tree stem growth and leaf litterfall upscaled using machine-learning algorithms show that leaf flushing at the onset of a drought results in canopy rejuvenation and green-up during drought while simultaneously trees excessively shed older leaves and tree stem growth declines. Canopy green-up during drought therefore does not necessarily point to enhanced tree growth and improved forest health.
Boris Sakschewski, Werner von Bloh, Markus Drüke, Anna Amelia Sörensson, Romina Ruscica, Fanny Langerwisch, Maik Billing, Sarah Bereswill, Marina Hirota, Rafael Silva Oliveira, Jens Heinke, and Kirsten Thonicke
Biogeosciences, 18, 4091–4116, https://doi.org/10.5194/bg-18-4091-2021, https://doi.org/10.5194/bg-18-4091-2021, 2021
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This study shows how local adaptations of tree roots across tropical and sub-tropical South America explain patterns of biome distribution, productivity and evapotranspiration on this continent. By allowing for high diversity of tree rooting strategies in a dynamic global vegetation model (DGVM), we are able to mechanistically explain patterns of mean rooting depth and the effects on ecosystem functions. The approach can advance DGVMs and Earth system models.
Cited articles
Andrew, M. H., and Mott, J. J.: Annuals with transient seed banks: the population biology of indigenous Sorghum species of tropical north-west Australia, Aust. J. Ecol., 8, 265–276, 1983.
Baldocchi, D., Falge, E., Gu, L., Olson, R., Hollinger, D., Running, S., Anthoni, P., Bernhofer, C., Davis, K., Evans, R., Fuentes, J., Goldstein, A., Katul, G., Law, B., Lee, X., Malhi, Y., Meyers, T., Munger, W., Oechel, W., Paw, U. K. T., Pilegaard, K., Schmid, H. P., Valentini, R., Verma, S., Vesala, T., Wilson, K., and Wofsy, S.: FLUXNET: A New Tool to Study the Temporal and Spatial Variability of Ecosystem-Scale Carbon Dioxide, Water Vapor, and Energy Flux Densities, Bull. Am. Meteorol. Soc., 82, 2415–2434, 2001.
Baret, F., de Solan, B., Lopez-Lozano, R., Ma, K., and Weiss, M.: GAI estimates of row crops from downward looking digital photos taken perpendicular to rows at 57.5° zenith angle: Theoretical considerations based on 3D architecture models and application to wheat crops, Agr. Forest Meteorol., 150, 1393–1401, https://doi.org/10.1016/j.agrformet.2010.04.011, 2010.
Beringer, J., Hutley, L. B., Tapper, N. J., and Cernusak, L. A.: Savanna fires and their impact on net ecosystem productivity in North Australia, Glob. Change Biol., 13, 990–1004, 2007.
Beringer, J.: Howard Springs OzFlux tower site OzFlux: Australian and New Zealand Flux Research and Monitoring, hdl:102.100.100/14234, 2013a.
Beringer, J.: Howard Springs Understory OzFlux tower site OzFlux: Australian and New Zealand Flux Research and Monitoring, hdl: 102.100.100/14240, 2013b.
Beringer, J., Hutley, L. B., Abramson, D., Arndt, S. K., Briggs, P., Bristow, M., Canadell, J. G., Cernusak, L. A., Eamus, D., Edwards, A. C., Evans, B. J., Fest, B., Goergen, K., Grover, S. P., Hacker, J., Haverd, V., Kanniah, K., Livesley, S. J., Lynch, A., Maier, S., Moore, C., Raupach, M., Russell-Smith, J., Scheiter, S., Tapper, N. J., and Uotila, P.: Fire in Australian savannas: From leaf to landscape, Glob. Change Biol., 21, 62–81, https://doi.org/10.1111/gcb.12686, 2015.
Beringer, J., Hutley, L. B., McHugh, I., Arndt, S. K., Campbell, D., Cleugh, H. A., Cleverly, J., Resco de Dios, V., Eamus, D., Evans, B., Ewenz, C., Grace, P., Griebel, A., Haverd, V., Hinko-Najera, N., Huete, A., Isaac, P., Kanniah, K., Leuning, R., Liddell, M. J., Macfarlane, C., Meyer, W., Moore, C., Pendall, E., Phillips, A., Phillips, R. L., Prober, S. M., Restrepo-Coupe, N., Rutledge, S., Schroder, I., Silberstein, R., Southall, P., Yee, M. S., Tapper, N. J., van Gorsel, E., Vote, C., Walker, J., and Wardlaw, T.: An introduction to the Australian and New Zealand flux tower network – OzFlux, Biogeosciences, 13, 5895–5916, https://doi.org/10.5194/bg-13-5895-2016, 2016a.
Beringer, J., McHugh, I., Hutley, L. B., Isaac, P., and Kljun, N.: Dynamic INtegrated Gap-filling and partitioning for OzFlux (DINGO), Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-188, in review, 2016b.
Bond, W. J.: What limits trees in C4 grasslands and savannas?, Annu. Rev. Ecol. Evol. S., 39, 641–659, 2008.
Bond, W. J., Midgley, G. F., and Woodward, F. I.: The importance of low atmospheric CO2 and fire in promoting the spread of grasslands and savannas, Glob. Change Biol., 9, 973–982, 2003.
Bowman, D. M. J. S.: Australian Rainforests : Islands of Green in a Land of Fire, Cambridge University Press, Cambridge, 2000.
Bowman, D. M. J. S. and Prior, L. D.: Why do evergreen trees dominate the Australian seasonal tropics?, Aust. J. Bot., 53, 379–399, 2005.
Broich, M., Huete, A., Paget, M., Ma, X., Tulbure, M., Coupe, N. R., Evans, B., Beringer, J., Devadas, R., Davies, K., and Held, A.: A spatially explicit land surface phenology data product for science, monitoring and natural resources management applications, Environ. Modell. Softw., 64, 191–204, https://doi.org/10.1016/j.envsoft.2014.11.017, 2015.
Brown, T. B., Hultine, K. R., Steltzer, H., Denny, E. G., Denslow, M. W., Granados, J., Henderson, S., Moore, D., Nagai, S., Sanclements, M., Sánchez-Azofeifa, A., Sonnentag, O., Tazik, D., and Richardson, A. D.: Using phenocams to monitor our changing earth: Toward a global phenocam network, Front. Ecol. Environ., 14, 84–93, https://doi.org/10.1002/fee.1222, 2016.
Cernusak, L. A., Hutley, L. B., Beringer, J., and Tapper, N. J.: Stem and leaf gas exchange and their responses to fire in a north Australian tropical savanna, Plant Cell Environ., 29, 632–646, 2006.
Chen, X., Eamus, D., and Hutley, L. B.: Seasonal patterns of soil carbon dioxide efflux from a wet-dry tropical savanna of northern Australia, Aust. J. Bot., 50, 43–51, https://doi.org/10.1071/BT01049, 2002.
Chen, X., Hutley, L. B., and Eamus, D.: Carbon balance of a tropical savanna of northern Australia, Oecologia, 137, 405–416, 2003.
Cook, G. D. and Heerdegen, R. G.: Spatial variation in the duration of the rainy season in monsoonal Australia, Int. J. Climatol., 21, 1723–1732, 2001.
Cook, G. D., Williams, R. J., Hutley, L. B., O'Grady, A. P., and Liedloff, A. C.: Variation in vegetative water use in the savannas of the North Australian Tropical Transect, J. Veg. Sci., 13, 413–418, 2002.
Coops, N. C., Black, T. A., Jassal, R. S., Trofymow, J. A., and Morgenstern, K.: Comparison of MODIS, eddy covariance determined and physiologically modelled gross primary production (GPP) in a Douglas-fir forest stand, Remote Sens. Environ., 107, 385–401, https://doi.org/10.1016/j.rse.2006.09.010, 2007.
De Bie, S., Ketner, P., Paasse, M., and Geerling, C.: Woody plant phenology in the West Africa savanna, J. Biogeogr., 25, 883–900, https://doi.org/10.1046/j.1365-2699.1998.00229.x, 1998.
Eamus, D., Myers, B., Duff, G., and Williams, D.: Seasonal changes in photosynthesis of eight savanna tree species, Tree Physiol., 19, 665–671, 1999.
Eamus, D., Hutley, L. B., and O'Grady, A. P.: Daily and seasonal patterns of carbon and water fluxes above a north Australian savanna, Tree Physiol., 21, 977–988, 2001.
Eamus, D., Chen, X., Kelley, G., and Hutley, L. B.: Root biomass and root fractal analyses of an open Eucalyptus forest in a savanna of north Australia, Aust. J. Bot., 50, 31–41, https://doi.org/10.1071/BT01054, 2002.
Eberhardt, I. D. R., Schultz, B., Rizzi, R., Sanches, I. D., Formaggio, A. R., Atzberger, C., Mello, M. P., Immitzer, M., Trabaquini, K., Foschiera, W., and Luiz, A. J. B.: Cloud cover assessment for operational crop monitoring systems in tropical areas, Remote Sens., 8, 1–14, https://doi.org/10.3390/rs8030219, 2016.
Gentine, P., Entekhabi, D., Chehbouni, A., Boulet, G., and Duchemin, B.: Analysis of evaporative fraction diurnal behaviour, Agr. Forest Meteorol., 143, 13–29, https://doi.org/10.1016/j.agrformet.2006.11.002, 2007.
Gillespie, A. R., Kahle, A. B., and Walker, R. E.: Color enhancement of highly correlated images, II. Channel ratio and “chromaticity” transformation techniques, Remote Sens. Environ., 22, 343–365, 1987.
Grace, J., José, J. S., Meir, P., Miranda, H. S., and Montes, R. A.: Productivity and carbon fluxes of tropical savannas, J. Biogeogr., 33, 387–400, 2006.
Hanan, N. P. and Lehmann, C. E. R.: Tree-Grass interactions in savannas: Paradigms, contradictions and conceptual models, in: Ecosystem Function in Savannas, edited by: Hill, M. J. and Hanan, N. P., CRC Press, Florida, 2010.
Hoch, W. A., Zeldin, E. L., and McCown, B. H.: Physiological significance of anthocyanins during autumnal leaf senescence, Tree Physiol., 21, 1–8, 2001.
Hoffmann, W. A., Geiger, E. L., Gotsch, S. G., Rossatto, D. R., Silva, L. C. R., Lau, O. L., Haridasan, M., and Franco, A. C.: Ecological thresholds at the savanna-forest boundary: How plant traits, resources and fire govern the distribution of tropical biomes, Ecol. Lett., 15, 759–768, 2012.
Huete, A., Didan, K., Miura, T., Rodriguez, E. P., Gao, X., and Ferreira, L. G.: Overview of the radiometric and biophysical performance of the MODIS vegetation indices, Remote Sens. Environ., 83, 195–213, 2002.
Hufkens, K., Friedl, M., Sonnentag, O., Braswell, B. H., Milliman, T., and Richardson, A. D.: Linking near-surface and satellite remote sensing measurements of deciduous broadleaf forest phenology, Remote Sens. Environ., 117, 307–321, https://doi.org/10.1016/j.rse.2011.10.006, 2012.
Hutley, L. and Beringer, J.: Distrubance and climatic drivers of carbon dynamics of a north Australian tropical savanna, in: Ecosystem Function in Savannas: Measurements and Modelling at Landscape to Global Scales, edited by: Hill, M. J. and Hanan, N. P., CRC Press, Boca Raton, 57–75, 2011.
Hutley, L. B., O'Grady, A. P., and Eamus, D.: Evapotranspiration from eucalypt open-forest savanna of northern australia, Funct. Ecol., 14, 183–194, 2000.
Hutley, L. B., Beringer, J., Isaac, P. R., Hacker, J. M., and Cernusak, L. A.: A sub-continental scale living laboratory: Spatial patterns of savanna vegetation over a rainfall gradient in northern Australia, Agr. Forest Meteorol., 151, 1417–1428, 2011.
Hutley, L. B., Evans, B. J., Beringer, J., Cook, G. D., Maier, S. W., and Razon, E.: Impacts of an extreme cyclone event on landscape-scale savanna fire, productivity and greenhouse gas emissions, Environ. Res. Lett., 8, 1–12, 2013.
Ide, R. and Oguma, H.: Use of digital cameras for phenological observations, Ecol. Inform., 5, 339–347, https://doi.org/10.1016/j.ecoinf.2010.07.002, 2010.
Isbell, R. F.: The Australian Soil Classification, CSIRO Publishing, Collingwood, VIC, 1996.
Kaimal, J. C. and Finnigan, J. J.: Atmospheric boundary layer flows: their structure and measurement, Oxford University Press, New York, 1994.
Kanniah, K. D., Beringer, J., Hutley, L. B., Tapper, N. J., and Zhu, X.: Evaluation of Collections 4 and 5 of the MODIS Gross Primary Productivity product and algorithm improvement at a tropical savanna site in northern Australia, Remote Sens. Environ., 113, 1808–1822, 2009.
Kanniah, K. D., Beringer, J., and Hutley, L. B.: The comparative role of key environmental factors in determining savanna productivity and carbon fluxes: A review, with special reference to Northern Australia, Prog. Phys. Geog., 34, 459–490, https://doi.org/10.1177/0309133310364933, 2010.
Kanniah, K. D., Beringer, J., and Hutley, L. B.: Environmental controls on the spatial variability of savanna productivity in the Northern Territory, Australia, Agr. Forest Meteorol., 151, 1429–1439, 2011.
Keith, H., van Gorsel, E., Jacobsen, K. L., and Cleugh, H. A.: Dynamics of carbon exchange in a Eucalyptus forest in response to interacting disturbance factors, Agr. Forest Meteorol., 153, 67–81, https://doi.org/10.1016/j.agrformet.2011.07.019, 2012.
Kelley, G., O'Grady, A. P., Hutley, L. B., and Eamus, D.: A comparison of tree water use in two contiguous vegetation communities of the seasonally dry tropics of northern Australia: The importance of site water budget to tree hydraulics, Aust. J. Bot., 55, 700–708, https://doi.org/10.1071/BT07021, 2007.
Lee, D. W., O'Keefe, J., Holbrook, N. M., and Feild, T. S.: Pigment dynamics and autumn leaf senescence in a New England deciduous forest, eastern USA, Ecol. Res., 18, 677–694, 2003.
Lehmann, C. E. R., Anderson, T. M., Sankaran, M., Higgins, S. I., Archibald, S., Hoffmann, W. A., Hanan, N. P., Williams, R. J., Fensham, R. J., Felfili, J., Hutley, L. B., Ratnam, J., San Jose, J., Montes, R., Franklin, D., Russell-Smith, J., Ryan, C. M., Durigan, G., Hiernaux, P., Haidar, R., Bowman, D. M. J. S., and Bond, W. J.: Savanna vegetation-fire-climate relationships differ among continents, Science, 343, 548–552, 2014.
Ma, X., Huete, A., Yu, Q., Coupe, N. R., Davies, K., Broich, M., Ratana, P., Beringer, J., Hutley, L. B., Cleverly, J., Boulain, N., and Eamus, D.: Spatial patterns and temporal dynamics in savanna vegetation phenology across the north australian tropical transect, Remote Sens. Environ., 139, 97–115, 2013.
Ma, X., Huete, A., Yu, Q., Restrepo-Coupe, N., Beringer, J., Hutley, L. B., Kanniah, K. D., Cleverly, J., and Eamus, D.: Parameterization of an ecosystem light-use-efficiency model for predicting savanna GPP using MODIS EVI, Remote Sens. Environ., 154, 253–271, https://doi.org/10.1016/j.rse.2014.08.025, 2014.
Migliavacca, M., Galvagno, M., Cremonese, E., Rossini, M., Meroni, M., Sonnentag, O., Cogliati, S., Manca, G., Diotri, F., Busetto, L., Cescatti, A., Colombo, R., Fava, F., Morra di Cella, U., Pari, E., Siniscalco, C., and Richardson, A. D.: Using digital repeat photography and eddy covariance data to model grassland phenology and photosynthetic CO2 uptake, Agr. Forest Meteorol., 151, 1325–1337, 2011.
Monteith, J. L.: Solar Radiation and Productivity in Tropical Ecosystems, J. Appl. Ecol., 9, 747–766, https://doi.org/10.2307/2401901, 1972.
Moore, C. E., Beringer, J., Evans, B., Hutley, L. B., McHugh, I., and Tapper, N. J.: The contribution of trees and grasses to productivity of an Australian tropical savanna, Biogeosciences, 13, 2387–2403, https://doi.org/10.5194/bg-13-2387-2016, 2016a.
Moore, C. E., Brown, T., Keenan, T. F., Duursma, R. A., van Dijk, A. I. J. M., Beringer, J., Culvenor, D., Evans, B., Huete, A., Hutley, L. B., Maier, S., Restrepo-Coupe, N., Sonnentag, O., Specht, A., Taylor, J. R., van Gorsel, E., and Liddell, M. J.: Reviews and syntheses: Australian vegetation phenology: new insights from satellite remote sensing and digital repeat photography, Biogeosciences, 13, 5085–5102, https://doi.org/10.5194/bg-13-5085-2016, 2016b.
Murphy, B. P., Russell-Smith, J., and Prior, L. D.: Frequent fires reduce tree growth in northern Australian savannas: Implications for tree demography and carbon sequestration, Glob. Change Biol., 16, 331–343, 2010.
Noormets, A.: Phenology of Ecosystem Processes, Springer, New York, 2009.
O'Grady, A. P., Eamus, D., and Hutley, L. B.: Transpiration increases during the dry season: Patterns of tree water use in eucalypt open-forests of northern Australia, Tree Physiol., 19, 591–597, 1999.
O'Grady, A. P., Chen, X., Eamus, D., and Hutley, L. B.: Composition, leaf area index and standing biomass of eucalypt open forests near Darwin in the Northern Territory, Australia, Aust. J. Bot., 48, 629–638, 2000.
Osborne, C. P. and Beerling, D. J.: Nature's green revolution: The remarkable evolutionary rise of C4 plants, Philos. T. R. Soc. B, 361, 173–194, https://doi.org/10.1038/35075035, 2006.
Prior, L. D., Eamus, D., and Bowman, D. M. J. S.: Tree growth rates in north Australian savanna habitats: Seasonal patterns and correlations with leaf attributes, Aust. J. Bot., 52, 303–314, https://doi.org/10.1071/BT03119, 2004.
Ratnam, J., Bond, W. J., Fensham, R. J., Hoffmann, W. A., Archibald, S., Lehmann, C. E. R., Anderson, M. T., Higgins, S. I., and Sankaran, M.: When is a “forest” a savanna, and why does it matter?, Glob. Ecol. Biogeogr., 20, 653–660, 2011.
Reichstein, M., Falge, E., Baldocchi, D., Papale, D., Aubinet, M., Berbigier, P., Bernhofer, C., Buchmann, N., Gilmanov, T., Granier, A., Grünwald, T., Havránková, K., Ilvesniemi, H., Janous, D., Knohl, A., Laurila, T., Lohila, A., Loustau, D., Matteucci, G., Meyers, T., Miglietta, F., Ourcival, J. M., Pumpanen, J., Rambal, S., Rotenberg, E., Sanz, M., Tenhunen, J., Seufert, G., Vaccari, F., Vesala, T., Yakir, D., and Valentini, R.: On the separation of net ecosystem exchange into assimilation and ecosystem respiration: Review and improved algorithm, Glob. Change Biol., 11, 1424–1439, 2005.
Restrepo-Coupe, N., Huete, A., Davies, K., Cleverly, J., Beringer, J., Eamus, D., van Gorsel, E., Hutley, L. B., and Meyer, W. S.: MODIS vegetation products as proxies of photosynthetic potential along a gradient of meteorologically and biologically driven ecosystem productivity, Biogeosciences, 13, 5587–5608, https://doi.org/10.5194/bg-13-5587-2016, 2016.
Richardson, A. D., Jenkins, J. P., Braswell, B. H., Hollinger, D. Y., Ollinger, S. V., and Smith, M. L.: Use of digital webcam images to track spring green-up in a deciduous broadleaf forest, Oecologia, 152, 323–334, 2007.
Richardson, A. D., Braswell, B. H., Hollinger, D. Y., Jenkins, J. P., and Ollinger, S. V.: Near-surface remote sensing of spatial and temporal variation in canopy phenology, Ecol. Appl., 19, 1417–1428, 2009a.
Richardson, A. D., Hollinger, D. Y., Dail, D. B., Lee, J. T., Munger, J. W., and O'Keefe, J.: Influence of spring phenology on seasonal and annual carbon balance in two contrasting New England forests, Tree Physiol., 29, 321–331, 2009b.
Richardson, A. D., Black, T. A., Ciais, P., Delbart, N., Friedl, M. A., Gobron, N., Hollinger, D. Y., Kutsch, W. L., Longdoz, B., Luyssaert, S., Migliavacca, M., Montagnani, L., Munger, J. W., Moors, E., Piao, S., Rebmann, C., Reichstein, M., Saigusa, N., Tomelleri, E., Vargas, R., and Varlagin, A.: Influence of spring and autumn phenological transitions on forest ecosystem productivity, Philos. T. R. Soc. B, 365, 3227–3246, 2010.
Richardson, A. D., Keenan, T. F., Migliavacca, M., Ryu, Y., Sonnentag, O., and Toomey, M.: Climate change, phenology, and phenological control of vegetation feedbacks to the climate system, Agr. Forest Meteorol., 169, 156–173, 2013.
Rogers, C. and Beringer, J.: Describing rainfall in northern Australia using multiple climate indices, Biogeosciences Discuss., https://doi.org/10.5194/bg-2016-172, in review, 2016.
Running, S. W. and Zhao, M.: User's Guide: Daily GPP and annual NPP (MOD17 A2/A3) products, NASA Earth Observing System MODIS land algorithm 1–28, 2015.
Ryu, Y., Sonnentag, O., Nilson, T., Vargas, R., Kobayashi, H., Wenk, R., and Baldocchi, D. D.: How to quantify tree leaf area index in an open savanna ecosystem: A multi-instrument and multi-model approach, Agr. Forest Meteorol., 150, 63–76, https://doi.org/10.1016/j.agrformet.2009.08.007, 2010.
Ryu, Y., Baldocchi, D. D., Kobayashi, H., Van Ingen, C., Li, J., Black, T. A., Beringer, J., Van Gorsel, E., Knohl, A., Law, B. E., and Roupsard, O.: Integration of MODIS land and atmosphere products with a coupled-process model to estimate gross primary productivity and evapotranspiration from 1 km to global scales, Global Biogeochem. Cy., 25, 1–24, 2011.
Ryu, Y., Verfaillie, J., Macfarlane, C., Kobayashi, H., Sonnentag, O., Vargas, R., Ma, S., and Baldocchi, D. D.: Continuous observation of tree leaf area index at ecosystem scale using upward-pointing digital cameras, Remote Sens. Environ., 126, 116–125, https://doi.org/10.1016/j.rse.2012.08.027, 2012.
Sage, R. F.: The evolution of C4 photosynthesis, New Phytol., 161, 341–370, 2004.
Savitzky, A. and Golay, M. J. E.: Smoothing and differentiation of data by simplified least squares procedures, Anal. Chem., 36, 1627–1639, 1964.
Scheiter, S., Higgins, S. I., Beringer, J., and Hutley, L. B.: Climate change and long-term fire management impacts on Australian savannas, New Phytol., 205, 1211–1226, https://doi.org/10.1111/nph.13130, 2015.
Scholes, R. J. and Archer, S. R.: Tree-grass interactions in Savannas, Annu. Rev. Ecol. Syst., 28, 517–544, 1997.
Scott, K. A., Setterfield, S. A., Douglas, M. M., and Andersen, A. N.: Environmental factors influencing the establishment, height and fecundity of the annual grass Sorghum intrans in an Australian tropical savanna, J. Trop. Ecol., 26, 313–322, 2010.
Silva, I. A., Da Silva, D. M., De Carvalho, G. H., and Batalha, M. A.: Reproductive phenology of Brazilian savannas and riparian forests: Environmental and phylogenetic issues, Ann. Forest Sci., 68, 1207–1215, https://doi.org/10.1007/s13595-011-0071-5, 2011.
Sjöström, M., Zhao, M., Archibald, S., Arneth, A., Cappelaere, B., Falk, U., de Grandcourt, A., Hanan, N., Kergoat, L., Kutsch, W., Merbold, L., Mougin, E., Nickless, A., Nouvellon, Y., Scholes, R. J., Veenendaal, E. M., and Ardö, J.: Evaluation of MODIS gross primary productivity for Africa using eddy covariance data, Remote Sens. Environ., 131, 275–286, https://doi.org/10.1016/j.rse.2012.12.023, 2013.
Sonnentag, O., Hufkens, K., Teshera-Sterne, C., Young, A. M., Friedl, M., Braswell, B. H., Milliman, T., O'Keefe, J., and Richardson, A. D.: Digital repeat photography for phenological research in forest ecosystems, Agr. Forest Meteorol., 152, 159–177, 2012.
Specht, R. L.: Vegetation, in: Australian Environment, 4 Edn., edited by: Leeper, G. W., Melbourne University Press, Melbourne, 44–67, 1972.
Tagesson, T., Fensholt, R., Cropley, F., Guiro, I., Horion, S., Ehammer, A., and Ardö, J.: Dynamics in carbon exchange fluxes for a grazed semi-arid savanna ecosystem in West Africa, Agr. Ecosys. Environ., 205, 15–24, https://doi.org/10.1016/j.agee.2015.02.017, 2015.
Toomey, M., Friedl, M. A., Frolking, S., Hufkens, K., Klosterman, S., Sonnentag, O., Baldocchi, D. D., Bernacchi, C. J., Biraud, S. C., Bohrer, G., Brzostek, E., Burns, S. P., Coursolle, C., Hollinger, D. Y., Margolis, H. A., McCaughey, H., Monson, R. K., Munger, J. W., Pallardy, S., Phillips, R. P., Torn, M. S., Wharton, S., Zeri, M., and Richardson, A. D.: Greenness indices from digital cameras predict the timing and seasonal dynamics of canopy-scale photosynthesis, Ecol. Appl., 25, 99–115, 2015.
Tucker, C. J.: Red and photographic infrared linear combinations for monitoring vegetation, Remote Sens. Environ., 8, 127–150, 1979.
van Gorsel, E., Delpierre, N., Leuning, R., Black, A., Munger, J. W., Wofsy, S., Aubinet, M., Feigenwinter, C., Beringer, J., Bonal, D., Chen, B., Chen, J., Clement, R., Davis, K. J., Desai, A. R., Dragoni, D., Etzold, S., Grünwald, T., Gu, L., Heinesch, B., Hutyra, L. R., Jans, W. W. P., Kutsch, W., Law, B. E., Leclerc, M. Y., Mammarella, I., Montagnani, L., Noormets, A., Rebmann, C., and Wharton, S.: Estimating nocturnal ecosystem respiration from the vertical turbulent flux and change in storage of CO2, Agr. Forest Meteorol., 149, 1919–1930, 2009.
Van Langevelde, F., Van De Vijver, C. A. D. M., Kumar, L., Van De Koppel, J., De Ridder, N., Van Andel, J., Skidmore, A. K., Hearne, J. W., Stroosnijder, L., Bond, W. J., Prins, H. H. T., and Rietkerk, M.: Effects of fire and herbivory on the stability of savanna ecosystems, Ecology, 84, 337–350, 2003.
Weiss, M., Baret, F., Smith, G. J., Jonckheere, I., and Coppin, P.: Review of methods for in situ leaf area index (LAI) determination Part II, Estimation of LAI, errors and sampling, Agr. Forest Meteorol., 121, 37–53, 2004.
Werner, P. A. and Franklin, D. C.: Resprouting and mortality of juvenile eucalypts in an Australian savanna: Impacts of fire season and annual sorghum, Aust. J. Bot., 58, 619–628, https://doi.org/10.1071/BT10139, 2010.
Werner, P. A. and Prior, L. D.: Demography and growth of subadult savanna trees: Interactions of life history, size, fire season, and grassy understory, Ecol. Monogr., 83, 67–93, 2013.
Whitley, R. J., Macinnis-Ng, C. M. O., Hutley, L. B., Beringer, J., Zeppel, M., Williams, M., Taylor, D., and Eamus, D.: Is productivity of mesic savannas light limited or water limited? Results of a simulation study, Glob. Change Biol., 17, 3130–3149, https://doi.org/10.1016/j.agformet.2011.01.006, 2011.
Williams, R. J., Myers, B. A., Muller, W. J., Duff, G. A., and Eamus, D.: Leaf phenology of woody species in a North Australian tropical savanna, Ecology, 78, 2542–2558, 1997.
Wingate, L., Ogée, J., Cremonese, E., Filippa, G., Mizunuma, T., Migliavacca, M., Moisy, C., Wilkinson, M., Moureaux, C., Wohlfahrt, G., Hammerle, A., Hörtnagl, L., Gimeno, C., Porcar-Castell, A., Galvagno, M., Nakaji, T., Morison, J., Kolle, O., Knohl, A., Kutsch, W., Kolari, P., Nikinmaa, E., Ibrom, A., Gielen, B., Eugster, W., Balzarolo, M., Papale, D., Klumpp, K., Köstner, B., Grünwald, T., Joffre, R., Ourcival, J.-M., Hellstrom, M., Lindroth, A., George, C., Longdoz, B., Genty, B., Levula, J., Heinesch, B., Sprintsin, M., Yakir, D., Manise, T., Guyon, D., Ahrends, H., Plaza-Aguilar, A., Guan, J. H., and Grace, J.: Interpreting canopy development and physiology using a European phenology camera network at flux sites, Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, 2015.
Woebbecke, D. M., Meyer, G. E., Von Bargen, K., and Mortensen, D. A.: Color indices for weed identification under various soil, residue, and lighting conditions, T. Am. Soc. Agr. Eng., 38, 259–269, 1995.
Wu, J., Albert, L. P., Lopes, A. P., Restrepo-Coupe, N., Hayek, M., Wiedemann, K. T., Guan, K., Strark., S. C., Christoffersen, B., Prohaska, N., Tavares, J. V., Marostica, S., Kobayashi, H., Ferreira, M. L., Campos, K. S., da Silva, R., Brando, P. M., Dye, D. G., Huxman, T. E., Huete, A., Nelson, B. W., and Saleska, S. R.: Leaf development and demography explain photosynthetic seasonality in Amazon evergreen forests, Science, 351, 972–976, 2016.
Yan, H., Wang, S. Q., Billesbach, D., Oechel, W., Bohrer, G., Meyers, T., Martin, T. A., Matamala, R., Phillips, R. P., Rahman, F., Yu, Q., and Shugart, H. H.: Improved global simulations of gross primary product based on a new definition of water stress factor and a separate treatment of C3 and C4 plants, Ecol. Modell., 297, 42–59, https://doi.org/10.1016/j.ecolmodel.2014.11.002, 2015.
Yuan, W., Liu, S., Zhou, G., Zhou, G., Tieszen, L. L., Baldocchi, D., Bernhofer, C., Gholz, H., Goldstein, A. H., Goulden, M. L., Hollinger, D. Y., Hu, Y., Law, B. E., Stoy, P. C., Vesala, T., and Wofsy, S. C.: Deriving a light use efficiency model from eddy covariance flux data for predicting daily gross primary production across biomes, Agr. Forest Meteorol., 143, 189–207, https://doi.org/10.1016/j.agrformet.2006.12.001, 2007.
Zhao, M. and Running, S. W.: Drought-induced reduction in global terrestrial net primary production from 2000 through 2009, Science, 329, 940–943, https://doi.org/10.1126/science.1192666, 2010.
Zhu, X. G., Long, S. P., and Ort, D. R.: What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?, Curr. Opin. Biotech., 19, 153–159, https://doi.org/10.1016/j.copbio.2008.02.004, 2008.
Short summary
Separating tree and grass productivity dynamics in savanna ecosystems is vital for understanding how they function over time. We showed how tree-grass phenology information can improve model estimates of gross primary productivity in an Australian tropical savanna. Our findings will contribute towards improved modelling of productivity in savannas, which will assist with their management into the future.
Separating tree and grass productivity dynamics in savanna ecosystems is vital for understanding...
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