Articles | Volume 12, issue 1
https://doi.org/10.5194/bg-12-237-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
https://doi.org/10.5194/bg-12-237-2015
© Author(s) 2015. This work is distributed under
the Creative Commons Attribution 3.0 License.
the Creative Commons Attribution 3.0 License.
Research article
| 
14 Jan 2015
Research article |
| 14 Jan 2015
The importance of micrometeorological variations for photosynthesis and transpiration in a boreal coniferous forest
Lund University, Dept. of Physical Geography and Ecosystem Science, Lund, Sweden
now at: University of Copenhagen, Dept. of Geosciences and Natural Resource Management, Copenhagen, Denmark
F. Lagergren
Lund University, Dept. of Physical Geography and Ecosystem Science, Lund, Sweden
M. Mölder
Lund University, Dept. of Physical Geography and Ecosystem Science, Lund, Sweden
A. Lindroth
Lund University, Dept. of Physical Geography and Ecosystem Science, Lund, Sweden
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Gross primary productivity (GPP) describes the photosynthetic carbon assimilation, which plays an important role in the carbon cycle. We can measure GPP locally, but it is challenging to produce larger and continuous estimates. Here, we present an approach to extrapolate GPP to a global scale using satellite imagery and automated machine learning. We benchmark different models and predictor variables and achieve an estimate that can capture 75 % of the variation in GPP.
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Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
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We present a number of augmentations to the ecosystem model LPJ-GUESS, which will allow us to use it in studies of the interactions between the land biosphere and the climate. The new module enables calculation of fluxes of energy and water into the atmosphere that are consistent with the modelled vegetation processes. The modelled fluxes are in fair agreement with observations across 21 sites from the FLUXNET network.
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Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
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Short summary
Short summary
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Alex Resovsky, Michel Ramonet, Leonard Rivier, Jerome Tarniewicz, Philippe Ciais, Martin Steinbacher, Ivan Mammarella, Meelis Mölder, Michal Heliasz, Dagmar Kubistin, Matthias Lindauer, Jennifer Müller-Williams, Sebastien Conil, and Richard Engelen
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Short summary
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We present a technical description of a statistical methodology for extracting synoptic- and seasonal-length anomalies from greenhouse gas time series. The definition of what represents an anomalous signal is somewhat subjective, which we touch on throughout the paper. We show, however, that the method performs reasonably well in extracting portions of time series influenced by significant North Atlantic Oscillation weather episodes and continent-wide terrestrial biospheric aberrations.
Rafael Poyatos, Víctor Granda, Víctor Flo, Mark A. Adams, Balázs Adorján, David Aguadé, Marcos P. M. Aidar, Scott Allen, M. Susana Alvarado-Barrientos, Kristina J. Anderson-Teixeira, Luiza Maria Aparecido, M. Altaf Arain, Ismael Aranda, Heidi Asbjornsen, Robert Baxter, Eric Beamesderfer, Z. Carter Berry, Daniel Berveiller, Bethany Blakely, Johnny Boggs, Gil Bohrer, Paul V. Bolstad, Damien Bonal, Rosvel Bracho, Patricia Brito, Jason Brodeur, Fernando Casanoves, Jérôme Chave, Hui Chen, Cesar Cisneros, Kenneth Clark, Edoardo Cremonese, Hongzhong Dang, Jorge S. David, Teresa S. David, Nicolas Delpierre, Ankur R. Desai, Frederic C. Do, Michal Dohnal, Jean-Christophe Domec, Sebinasi Dzikiti, Colin Edgar, Rebekka Eichstaedt, Tarek S. El-Madany, Jan Elbers, Cleiton B. Eller, Eugénie S. Euskirchen, Brent Ewers, Patrick Fonti, Alicia Forner, David I. Forrester, Helber C. Freitas, Marta Galvagno, Omar Garcia-Tejera, Chandra Prasad Ghimire, Teresa E. Gimeno, John Grace, André Granier, Anne Griebel, Yan Guangyu, Mark B. Gush, Paul J. Hanson, Niles J. Hasselquist, Ingo Heinrich, Virginia Hernandez-Santana, Valentine Herrmann, Teemu Hölttä, Friso Holwerda, James Irvine, Supat Isarangkool Na Ayutthaya, Paul G. Jarvis, Hubert Jochheim, Carlos A. Joly, Julia Kaplick, Hyun Seok Kim, Leif Klemedtsson, Heather Kropp, Fredrik Lagergren, Patrick Lane, Petra Lang, Andrei Lapenas, Víctor Lechuga, Minsu Lee, Christoph Leuschner, Jean-Marc Limousin, Juan Carlos Linares, Maj-Lena Linderson, Anders Lindroth, Pilar Llorens, Álvaro López-Bernal, Michael M. Loranty, Dietmar Lüttschwager, Cate Macinnis-Ng, Isabelle Maréchaux, Timothy A. Martin, Ashley Matheny, Nate McDowell, Sean McMahon, Patrick Meir, Ilona Mészáros, Mirco Migliavacca, Patrick Mitchell, Meelis Mölder, Leonardo Montagnani, Georgianne W. Moore, Ryogo Nakada, Furong Niu, Rachael H. Nolan, Richard Norby, Kimberly Novick, Walter Oberhuber, Nikolaus Obojes, A. Christopher Oishi, Rafael S. Oliveira, Ram Oren, Jean-Marc Ourcival, Teemu Paljakka, Oscar Perez-Priego, Pablo L. Peri, Richard L. Peters, Sebastian Pfautsch, William T. Pockman, Yakir Preisler, Katherine Rascher, George Robinson, Humberto Rocha, Alain Rocheteau, Alexander Röll, Bruno H. P. Rosado, Lucy Rowland, Alexey V. Rubtsov, Santiago Sabaté, Yann Salmon, Roberto L. Salomón, Elisenda Sánchez-Costa, Karina V. R. Schäfer, Bernhard Schuldt, Alexandr Shashkin, Clément Stahl, Marko Stojanović, Juan Carlos Suárez, Ge Sun, Justyna Szatniewska, Fyodor Tatarinov, Miroslav Tesař, Frank M. Thomas, Pantana Tor-ngern, Josef Urban, Fernando Valladares, Christiaan van der Tol, Ilja van Meerveld, Andrej Varlagin, Holm Voigt, Jeffrey Warren, Christiane Werner, Willy Werner, Gerhard Wieser, Lisa Wingate, Stan Wullschleger, Koong Yi, Roman Zweifel, Kathy Steppe, Maurizio Mencuccini, and Jordi Martínez-Vilalta
Earth Syst. Sci. Data, 13, 2607–2649, https://doi.org/10.5194/essd-13-2607-2021, https://doi.org/10.5194/essd-13-2607-2021, 2021
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Transpiration is a key component of global water balance, but it is poorly constrained from available observations. We present SAPFLUXNET, the first global database of tree-level transpiration from sap flow measurements, containing 202 datasets and covering a wide range of ecological conditions. SAPFLUXNET and its accompanying R software package
sapfluxnetrwill facilitate new data syntheses on the ecological factors driving water use and drought responses of trees and forests.
Jan Pisek, Angela Erb, Lauri Korhonen, Tobias Biermann, Arnaud Carrara, Edoardo Cremonese, Matthias Cuntz, Silvano Fares, Giacomo Gerosa, Thomas Grünwald, Niklas Hase, Michal Heliasz, Andreas Ibrom, Alexander Knohl, Johannes Kobler, Bart Kruijt, Holger Lange, Leena Leppänen, Jean-Marc Limousin, Francisco Ramon Lopez Serrano, Denis Loustau, Petr Lukeš, Lars Lundin, Riccardo Marzuoli, Meelis Mölder, Leonardo Montagnani, Johan Neirynck, Matthias Peichl, Corinna Rebmann, Eva Rubio, Margarida Santos-Reis, Crystal Schaaf, Marius Schmidt, Guillaume Simioni, Kamel Soudani, and Caroline Vincke
Biogeosciences, 18, 621–635, https://doi.org/10.5194/bg-18-621-2021, https://doi.org/10.5194/bg-18-621-2021, 2021
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Understory vegetation is the most diverse, least understood component of forests worldwide. Understory communities are important drivers of overstory succession and nutrient cycling. Multi-angle remote sensing enables us to describe surface properties by means that are not possible when using mono-angle data. Evaluated over an extensive set of forest ecosystem experimental sites in Europe, our reported method can deliver good retrievals, especially over different forest types with open canopies.
Wim Verbruggen, Guy Schurgers, Stéphanie Horion, Jonas Ardö, Paulo N. Bernardino, Bernard Cappelaere, Jérôme Demarty, Rasmus Fensholt, Laurent Kergoat, Thomas Sibret, Torbern Tagesson, and Hans Verbeeck
Biogeosciences, 18, 77–93, https://doi.org/10.5194/bg-18-77-2021, https://doi.org/10.5194/bg-18-77-2021, 2021
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A large part of Earth's land surface is covered by dryland ecosystems, which are subject to climate extremes that are projected to increase under future climate scenarios. By using a mathematical vegetation model, we studied the impact of single years of extreme rainfall on the vegetation in the Sahel. We found a contrasting response of grasses and trees to these extremes, strongly dependent on the way precipitation is spread over the rainy season, as well as a long-term impact on CO2 uptake.
Camille Yver-Kwok, Carole Philippon, Peter Bergamaschi, Tobias Biermann, Francescopiero Calzolari, Huilin Chen, Sebastien Conil, Paolo Cristofanelli, Marc Delmotte, Juha Hatakka, Michal Heliasz, Ove Hermansen, Kateřina Komínková, Dagmar Kubistin, Nicolas Kumps, Olivier Laurent, Tuomas Laurila, Irene Lehner, Janne Levula, Matthias Lindauer, Morgan Lopez, Ivan Mammarella, Giovanni Manca, Per Marklund, Jean-Marc Metzger, Meelis Mölder, Stephen M. Platt, Michel Ramonet, Leonard Rivier, Bert Scheeren, Mahesh Kumar Sha, Paul Smith, Martin Steinbacher, Gabriela Vítková, and Simon Wyss
Atmos. Meas. Tech., 14, 89–116, https://doi.org/10.5194/amt-14-89-2021, https://doi.org/10.5194/amt-14-89-2021, 2021
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The Integrated Carbon Observation System (ICOS) is a pan-European research infrastructure which provides harmonized and high-precision scientific data on the carbon cycle and the greenhouse gas (GHG) budget. All stations have to undergo a rigorous assessment before being labeled, i.e., receiving approval to join the network. In this paper, we present the labeling process for the ICOS atmospheric network through the 23 stations that were labeled between November 2017 and November 2019.
Pertti Hari, Steffen Noe, Sigrid Dengel, Jan Elbers, Bert Gielen, Veli-Matti Kerminen, Bart Kruijt, Liisa Kulmala, Anders Lindroth, Ivan Mammarella, Tuukka Petäjä, Guy Schurgers, Anni Vanhatalo, Markku Kulmala, and Jaana Bäck
Atmos. Chem. Phys., 18, 13321–13328, https://doi.org/10.5194/acp-18-13321-2018, https://doi.org/10.5194/acp-18-13321-2018, 2018
Short summary
Short summary
The development of eddy-covariance measurements of ecosystem CO2 fluxes began a new era in the field studies of photosynthesis. The interpretation of the very variable CO2 fluxes in evergreen forests has been problematic especially in seasonal transition times. We apply two theoretical needle-level equations and show they can predict photosynthetic CO2 flux between the atmosphere and Scots pine forests. This has strong implications for the interpretation of the global change and boreal forests.
Kukka-Maaria Erkkilä, Anne Ojala, David Bastviken, Tobias Biermann, Jouni J. Heiskanen, Anders Lindroth, Olli Peltola, Miitta Rantakari, Timo Vesala, and Ivan Mammarella
Biogeosciences, 15, 429–445, https://doi.org/10.5194/bg-15-429-2018, https://doi.org/10.5194/bg-15-429-2018, 2018
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Global estimates of freshwater greenhouse gas emissions are usually based on simple gas transfer models that underestimate the emissions. Thus, comparison of different gas transfer models is required for evaluating the uncertainties. This study compares three commonly used methods for estimating greenhouse gas emissions over lakes. We conclude that simple gas transfer models underestimate the emissions and more recent models should be used for global freshwater greenhouse gas emission estimates.
Ylva van Meeningen, Guy Schurgers, Riikka Rinnan, and Thomas Holst
Biogeosciences, 14, 4045–4060, https://doi.org/10.5194/bg-14-4045-2017, https://doi.org/10.5194/bg-14-4045-2017, 2017
Short summary
Short summary
Leaf scale measurements have been performed on English oak, European beech and Norway spruce at a field site in Denmark to study the release of volatile compounds in response to a change in light. Whilst some compounds, like isoprene and sabinene, increased with increasing light, other compounds, like camphene, showed no light response for most of the trees. This can help to increase our knowledge of how species and compounds respond to light and to possibly improve how they can be modeled.
Emilie Öström, Zhou Putian, Guy Schurgers, Mikhail Mishurov, Niku Kivekäs, Heikki Lihavainen, Mikael Ehn, Matti P. Rissanen, Theo Kurtén, Michael Boy, Erik Swietlicki, and Pontus Roldin
Atmos. Chem. Phys., 17, 8887–8901, https://doi.org/10.5194/acp-17-8887-2017, https://doi.org/10.5194/acp-17-8887-2017, 2017
Short summary
Short summary
We used a model to study how biogenic volatile organic compounds (BVOCs) emitted from the boreal forest contribute to the formation and growth of particles in the atmosphere. Some of these particles are important climate forcers, acting as seeds for cloud droplet fomation. We implemented a new gas chemistry mechanism that describes how the BVOCs are oxidized and form low-volatility highly oxidized organic molecules. With the new mechanism we are able to accurately predict the particle growth.
Jing Tang, Guy Schurgers, Hanna Valolahti, Patrick Faubert, Päivi Tiiva, Anders Michelsen, and Riikka Rinnan
Biogeosciences, 13, 6651–6667, https://doi.org/10.5194/bg-13-6651-2016, https://doi.org/10.5194/bg-13-6651-2016, 2016
Short summary
Short summary
Arctic is warming at twice the global average speed and the warming-induced increases in biogenic volatile organic compound (BVOC) emissions from Arctic plants are expected to be drastic. This modelling study aims to investigate BVOC emission responses to warming. The results show that 2 °C summer warming can increase annual emissions by 56 % and the short-term warming responses are strongly impacted by leaf temperature, while the long-time responses are interacted with vegetation changes.
Ylva van Meeningen, Guy Schurgers, Riikka Rinnan, and Thomas Holst
Biogeosciences, 13, 6067–6080, https://doi.org/10.5194/bg-13-6067-2016, https://doi.org/10.5194/bg-13-6067-2016, 2016
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English oak and European beech are common European trees known to release volatile compounds such as isoprene and monoterpenes. By doing leaf chamber measurements at three sites in Europe, the aim was to study how the emission differed for cloned trees growing at different sites. The measured emission rates from clones varied between sites, but the relative compound contribution was stable both within and between sites. This can help to increase our knowledge of emission pattern variability.
Minchao Wu, Guy Schurgers, Markku Rummukainen, Benjamin Smith, Patrick Samuelsson, Christer Jansson, Joe Siltberg, and Wilhelm May
Earth Syst. Dynam., 7, 627–647, https://doi.org/10.5194/esd-7-627-2016, https://doi.org/10.5194/esd-7-627-2016, 2016
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On Earth, vegetation does not merely adapt to climate but also imposes significant influences on climate with both local and remote effects. In this study we evaluated the role of vegetation in African climate with a regional Earth system model. By the comparison between the experiments with and without dynamic vegetation changes, we found that vegetation can influence climate remotely, resulting in modulating rainfall patterns over Africa.
Christian Stiegler, Magnus Lund, Torben Røjle Christensen, Mikhail Mastepanov, and Anders Lindroth
The Cryosphere, 10, 1395–1413, https://doi.org/10.5194/tc-10-1395-2016, https://doi.org/10.5194/tc-10-1395-2016, 2016
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In this study we investigate the impact of strong variability in snow accumulation during 2 subsequent years (2013–2014) on the land–atmosphere interactions and surface energy exchange in two high-Arctic tundra ecosystems (wet fen and dry heath) in Zackenberg, Northeast Greenland. We observe that the energy balance during the snowmelt periods and growing seasons was strongly regulated by the availability of snow meltwater, with strong impact on the overall ecosystem performance.
Almut Arneth, Risto Makkonen, Stefan Olin, Pauli Paasonen, Thomas Holst, Maija K. Kajos, Markku Kulmala, Trofim Maximov, Paul A. Miller, and Guy Schurgers
Atmos. Chem. Phys., 16, 5243–5262, https://doi.org/10.5194/acp-16-5243-2016, https://doi.org/10.5194/acp-16-5243-2016, 2016
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We study the potentially contrasting effects of enhanced ecosystem CO2 release in response to warmer temperatures vs. emissions of biogenic volatile organic compounds and their formation of secondary organic aerosol through a combination of measurements and modelling at a remote location in Eastern Siberia. The study aims to highlight the number of potentially opposing processes and complex interactions between vegetation physiology, soil processes and trace-gas exchanges in the climate system.
S. Olin, M. Lindeskog, T. A. M. Pugh, G. Schurgers, D. Wårlind, M. Mishurov, S. Zaehle, B. D. Stocker, B. Smith, and A. Arneth
Earth Syst. Dynam., 6, 745–768, https://doi.org/10.5194/esd-6-745-2015, https://doi.org/10.5194/esd-6-745-2015, 2015
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Croplands are vital ecosystems for human well-being. Properly managed they can supply food, store carbon and even sequester carbon from the atmosphere. Conversely, if poorly managed, croplands can be a source of nitrogen to inland and coastal waters, causing algal blooms, and a source of carbon dioxide to the atmosphere, accentuating climate change. Here we studied cropland management types for their potential to store carbon and minimize nitrogen losses while maintaining crop yields.
L. Wingate, J. Ogée, E. Cremonese, G. Filippa, T. Mizunuma, M. Migliavacca, C. Moisy, M. Wilkinson, C. Moureaux, G. Wohlfahrt, A. Hammerle, L. Hörtnagl, C. Gimeno, A. Porcar-Castell, M. Galvagno, T. Nakaji, J. Morison, O. Kolle, A. Knohl, W. Kutsch, P. Kolari, E. Nikinmaa, A. Ibrom, B. Gielen, W. Eugster, M. Balzarolo, D. Papale, K. Klumpp, B. Köstner, T. Grünwald, R. Joffre, J.-M. Ourcival, M. Hellstrom, A. Lindroth, C. George, B. Longdoz, B. Genty, J. Levula, B. Heinesch, M. Sprintsin, D. Yakir, T. Manise, D. Guyon, H. Ahrends, A. Plaza-Aguilar, J. H. Guan, and J. Grace
Biogeosciences, 12, 5995–6015, https://doi.org/10.5194/bg-12-5995-2015, https://doi.org/10.5194/bg-12-5995-2015, 2015
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The timing of plant development stages and their response to climate and management were investigated using a network of digital cameras installed across different European ecosystems. Using the relative red, green and blue content of images we showed that the green signal could be used to estimate the length of the growing season in broadleaf forests. We also developed a model that predicted the seasonal variations of camera RGB signals and how they relate to leaf pigment content and area well.
I. Gouttevin, M. Lehning, T. Jonas, D. Gustafsson, and M. Mölder
Geosci. Model Dev., 8, 2379–2398, https://doi.org/10.5194/gmd-8-2379-2015, https://doi.org/10.5194/gmd-8-2379-2015, 2015
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We improve the canopy module of a very detailed snow model, SNOWPACK, with a view of a more consistent representation of the sub-canopy energy balance with regard to the snowpack.
We show that adding a formulation of (i) the canopy heat capacity and (ii) a lowermost canopy layer (alike trunk + solar shaded leaves) yields significant improvement in the representation of sub-canopy incoming long-wave radiations, especially at nighttime. This energy is an important contributor to snowmelt.
F. Minunno, M. Peltoniemi, S. Launiainen, M. Aurela, A. Lindroth, A. Lohila, I. Mammarella, K. Minkkinen, and A. Mäkelä
Geosci. Model Dev. Discuss., https://doi.org/10.5194/gmdd-8-5089-2015, https://doi.org/10.5194/gmdd-8-5089-2015, 2015
Revised manuscript not accepted
N. Sudarchikova, U. Mikolajewicz, C. Timmreck, D. O'Donnell, G. Schurgers, D. Sein, and K. Zhang
Clim. Past, 11, 765–779, https://doi.org/10.5194/cp-11-765-2015, https://doi.org/10.5194/cp-11-765-2015, 2015
S. Olin, G. Schurgers, M. Lindeskog, D. Wårlind, B. Smith, P. Bodin, J. Holmér, and A. Arneth
Biogeosciences, 12, 2489–2515, https://doi.org/10.5194/bg-12-2489-2015, https://doi.org/10.5194/bg-12-2489-2015, 2015
E. Sundqvist, P. Vestin, P. Crill, T. Persson, and A. Lindroth
Biogeosciences, 11, 6095–6105, https://doi.org/10.5194/bg-11-6095-2014, https://doi.org/10.5194/bg-11-6095-2014, 2014
E. Podgrajsek, E. Sahlée, D. Bastviken, J. Holst, A. Lindroth, L. Tranvik, and A. Rutgersson
Biogeosciences, 11, 4225–4233, https://doi.org/10.5194/bg-11-4225-2014, https://doi.org/10.5194/bg-11-4225-2014, 2014
A. Arneth, S. Olin, R. Makkonen, P. Paasonen, T. Holst, M. Kajos, M. Kulmala, T. Maximov, P. A. Miller, and G. Schurgers
Atmos. Chem. Phys. Discuss., https://doi.org/10.5194/acpd-14-19149-2014, https://doi.org/10.5194/acpd-14-19149-2014, 2014
Revised manuscript not accepted
O. Peltola, A. Hensen, C. Helfter, L. Belelli Marchesini, F. C. Bosveld, W. C. M. van den Bulk, J. A. Elbers, S. Haapanala, J. Holst, T. Laurila, A. Lindroth, E. Nemitz, T. Röckmann, A. T. Vermeulen, and I. Mammarella
Biogeosciences, 11, 3163–3186, https://doi.org/10.5194/bg-11-3163-2014, https://doi.org/10.5194/bg-11-3163-2014, 2014
A. Meyer, L. Tarvainen, A. Nousratpour, R. G. Björk, M. Ernfors, A. Grelle, Å Kasimir Klemedtsson, A. Lindroth, M. Räntfors, T. Rütting, G. Wallin, P. Weslien, and L. Klemedtsson
Biogeosciences, 10, 7739–7758, https://doi.org/10.5194/bg-10-7739-2013, https://doi.org/10.5194/bg-10-7739-2013, 2013
N. Unger, K. Harper, Y. Zheng, N. Y. Kiang, I. Aleinov, A. Arneth, G. Schurgers, C. Amelynck, A. Goldstein, A. Guenther, B. Heinesch, C. N. Hewitt, T. Karl, Q. Laffineur, B. Langford, K. A. McKinney, P. Misztal, M. Potosnak, J. Rinne, S. Pressley, N. Schoon, and D. Serça
Atmos. Chem. Phys., 13, 10243–10269, https://doi.org/10.5194/acp-13-10243-2013, https://doi.org/10.5194/acp-13-10243-2013, 2013
Related subject area
Biogeochemistry: Modelling, Terrestrial
Non-steady-state stomatal conductance modeling and its implications: from leaf to ecosystem
Modelled forest ecosystem carbon–nitrogen dynamics with integrated mycorrhizal processes under elevated CO2
A chemical kinetics theory for interpreting the non-monotonic temperature dependence of enzymatic reactions
Using Free Air CO2 Enrichment data to constrain land surface model projections of the terrestrial carbon cycle
Multiscale assessment of North American terrestrial carbon balance
Simulating net ecosystem exchange under seasonal snow cover at an Arctic tundra site
Spatial biases reduce the ability of Earth system models to simulate soil heterotrophic respiration fluxes
Tropical dry forest response to nutrient fertilization: a model validation and sensitivity analysis
Connecting competitor, stress-tolerator and ruderal (CSR) theory and Lund Potsdam Jena managed Land 5 (LPJmL 5) to assess the role of environmental conditions, management and functional diversity for grassland ecosystem functions
A global fuel characteristic model and dataset for wildfire prediction
Can models adequately reflect how long-term nitrogen enrichment alters the forest soil carbon cycle?
Temporal variability of observed and simulated gross primary productivity, modulated by vegetation state and hydrometeorological drivers
Empirical upscaling of OzFlux eddy covariance for high-resolution monitoring of terrestrial carbon uptake in Australia
A modeling approach to investigate drivers, variability and uncertainties in O2 fluxes and O2 : CO2 exchange ratios in a temperate forest
Modeling coupled nitrification–denitrification in soil with an organic hotspot
Elevated atmospheric CO2 and vegetation structural changes contributed to GPP increase more than climate and forest cover changes in subtropical forests of China
A new method for estimating carbon dioxide emissions from drained peatland forest soils for the greenhouse gas inventory of Finland
Enabling a process-oriented hydro-biogeochemical model to simulate soil erosion and nutrient losses
Potassium limitation of forest productivity – Part 1: A mechanistic model simulating the effects of potassium availability on canopy carbon and water fluxes in tropical eucalypt stands
Potassium limitation of forest productivity – Part 2: CASTANEA-MAESPA-K shows a reduction in photosynthesis rather than a stoichiometric limitation of tissue formation
Global evaluation of terrestrial biogeochemistry in the Energy Exascale Earth System Model (E3SM) and the role of the phosphorus cycle in the historical terrestrial carbon balance
Assessing carbon storage capacity and saturation across six central US grasslands using data–model integration
Optimizing the carbonic anhydrase temperature response and stomatal conductance of carbonyl sulfide leaf uptake in the Simple Biosphere model (SiB4)
Exploring environmental and physiological drivers of the annual carbon budget of biocrusts from various climatic zones with a mechanistic data-driven model
Improved process representation of leaf phenology significantly shifts climate sensitivity of ecosystem carbon balance
Mapping of ESA's Climate Change Initiative land cover data to plant functional types for use in the CLASSIC land model
Exploring the impacts of unprecedented climate extremes on forest ecosystems: hypotheses to guide modeling and experimental studies
Effect of droughts and climate change on future soil weathering rates in Sweden
Information content in time series of litter decomposition studies and the transit time of litter in arid lands
Long-term changes of nitrogen leaching and the contributions of terrestrial nutrient sources to lake eutrophication dynamics on the Yangtze Plain of China
Towards an ensemble-based evaluation of land surface models in light of uncertain forcings and observations
Historical dynamics of terrestrial carbon during 1901–2016 as simulated by the CLM-Microbe model
Effect of land-use legacy on the future carbon sink for the conterminous US
Peatlands and their carbon dynamics in northern high latitudes from 1990 to 2300: a process-based biogeochemistry model analysis
Improved representation of phosphorus exchange on soil mineral surfaces reduces estimates of phosphorus limitation in temperate forest ecosystems
A coupled ground heat flux–surface energy balance model of evaporation using thermal remote sensing observations
Modeling nitrous oxide emissions from agricultural soil incubation experiments using CoupModel
Local-scale evaluation of the simulated interactions between energy, water and vegetation in ISBA, ORCHIDEE and a diagnostic model
Implementation and initial calibration of carbon-13 soil organic matter decomposition in the Yasso model
The carbon budget of the managed grasslands of Great Britain – informed by earth observations
Accounting for non-rainfall moisture and temperature improves litter decay model performance in a fog-dominated dryland system
Ideas and perspectives: Allocation of carbon from net primary production in models is inconsistent with observations of the age of respired carbon
Exploring the role of bedrock representation on plant transpiration response during dry periods at four forested sites in Europe
Effects of climate change in European croplands and grasslands: productivity, greenhouse gas balance and soil carbon storage
Assimilation of passive microwave vegetation optical depth in LDAS-Monde: a case study over the continental USA
Global modelling of soil carbonyl sulfide exchanges
Assessing the impacts of agricultural managements on soil carbon stocks, nitrogen loss, and crop production – a modelling study in eastern Africa
The effects of varying drought-heat signatures on terrestrial carbon dynamics and vegetation composition
Resolving temperature limitation on spring productivity in an evergreen conifer forest using a model–data fusion framework
A robust initialization method for accurate soil organic carbon simulations
Ke Liu, Yujie Wang, Troy S. Magney, and Christian Frankenberg
Biogeosciences, 21, 1501–1516, https://doi.org/10.5194/bg-21-1501-2024, https://doi.org/10.5194/bg-21-1501-2024, 2024
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Stomata are pores on leaves that regulate gas exchange between plants and the atmosphere. Existing land models unrealistically assume stomata can jump between steady states when the environment changes. We implemented dynamic modeling to predict gradual stomatal responses at different scales. Results suggested that considering this effect on plant behavior patterns in diurnal cycles was important. Our framework also simplified simulations and can contribute to further efficiency improvements.
Melanie A. Thurner, Silvia Caldararu, Jan Engel, Anja Rammig, and Sönke Zaehle
Biogeosciences, 21, 1391–1410, https://doi.org/10.5194/bg-21-1391-2024, https://doi.org/10.5194/bg-21-1391-2024, 2024
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Due to their crucial role in terrestrial ecosystems, we implemented mycorrhizal fungi into the QUINCY terrestrial biosphere model. Fungi interact with mineral and organic soil to support plant N uptake and, thus, plant growth. Our results suggest that the effect of mycorrhizal interactions on simulated ecosystem dynamics is minor under constant environmental conditions but necessary to reproduce and understand observed patterns under changing conditions, such as rising atmospheric CO2.
Jinyun Tang and William J. Riley
Biogeosciences, 21, 1061–1070, https://doi.org/10.5194/bg-21-1061-2024, https://doi.org/10.5194/bg-21-1061-2024, 2024
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A chemical kinetics theory is proposed to explain the non-monotonic relationship between temperature and biochemical rates. It incorporates the observed thermally reversible enzyme denaturation that is ensured by the ceaseless thermal motion of molecules and ions in an enzyme solution and three well-established theories: (1) law of mass action, (2) diffusion-limited chemical reaction theory, and (3) transition state theory.
Nina Raoult, Louis-Axel Edouard-Rambaut, Nicolas Vuichard, Vladislav Bastrikov, Anne Sofie Lansø, Bertrand Guenet, and Philippe Peylin
Biogeosciences, 21, 1017–1036, https://doi.org/10.5194/bg-21-1017-2024, https://doi.org/10.5194/bg-21-1017-2024, 2024
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Observations are used to reduce uncertainty in land surface models (LSMs) by optimising poorly constraining parameters. However, optimising against current conditions does not necessarily ensure that the parameters treated as invariant will be robust in a changing climate. Manipulation experiments offer us a unique chance to optimise our models under different (here atmospheric CO2) conditions. By using these data in optimisations, we gain confidence in the future projections of LSMs.
Kelsey T. Foster, Wu Sun, Yoichi P. Shiga, Jiafu Mao, and Anna M. Michalak
Biogeosciences, 21, 869–891, https://doi.org/10.5194/bg-21-869-2024, https://doi.org/10.5194/bg-21-869-2024, 2024
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Assessing agreement between bottom-up and top-down methods across spatial scales can provide insights into the relationship between ensemble spread (difference across models) and model accuracy (difference between model estimates and reality). We find that ensemble spread is unlikely to be a good indicator of actual uncertainty in the North American carbon balance. However, models that are consistent with atmospheric constraints show stronger agreement between top-down and bottom-up estimates.
Victoria R. Dutch, Nick Rutter, Leanne Wake, Oliver Sonnentag, Gabriel Hould Gosselin, Melody Sandells, Chris Derksen, Branden Walker, Gesa Meyer, Richard Essery, Richard Kelly, Phillip Marsh, Julia Boike, and Matteo Detto
Biogeosciences, 21, 825–841, https://doi.org/10.5194/bg-21-825-2024, https://doi.org/10.5194/bg-21-825-2024, 2024
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We undertake a sensitivity study of three different parameters on the simulation of net ecosystem exchange (NEE) during the snow-covered non-growing season at an Arctic tundra site. Simulations are compared to eddy covariance measurements, with near-zero NEE simulated despite observed CO2 release. We then consider how to parameterise the model better in Arctic tundra environments on both sub-seasonal timescales and cumulatively throughout the snow-covered non-growing season.
Bertrand Guenet, Jérémie Orliac, Lauric Cécillon, Olivier Torres, Laura Sereni, Philip A. Martin, Pierre Barré, and Laurent Bopp
Biogeosciences, 21, 657–669, https://doi.org/10.5194/bg-21-657-2024, https://doi.org/10.5194/bg-21-657-2024, 2024
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Heterotrophic respiration fluxes are a major flux between surfaces and the atmosphere, but Earth system models do not yet represent them correctly. Here we benchmarked Earth system models against observation-based products, and we identified the important mechanisms that need to be improved in the next-generation Earth system models.
Shuyue Li, Bonnie Waring, Jennifer Powers, and David Medvigy
Biogeosciences, 21, 455–471, https://doi.org/10.5194/bg-21-455-2024, https://doi.org/10.5194/bg-21-455-2024, 2024
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We used an ecosystem model to simulate primary production of a tropical forest subjected to 3 years of nutrient fertilization. Simulations parameterized such that relative allocation to fine roots increased with increasing soil phosphorus had leaf, wood, and fine root production consistent with observations. However, these simulations seemed to over-allocate to fine roots on multidecadal timescales, affecting aboveground biomass. Additional observations across timescales would benefit models.
Stephen Björn Wirth, Arne Poyda, Friedhelm Taube, Britta Tietjen, Christoph Müller, Kirsten Thonicke, Anja Linstädter, Kai Behn, Sibyll Schaphoff, Werner von Bloh, and Susanne Rolinski
Biogeosciences, 21, 381–410, https://doi.org/10.5194/bg-21-381-2024, https://doi.org/10.5194/bg-21-381-2024, 2024
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In dynamic global vegetation models (DGVMs), the role of functional diversity in forage supply and soil organic carbon storage of grasslands is not explicitly taken into account. We introduced functional diversity into the Lund Potsdam Jena managed Land (LPJmL) DGVM using CSR theory. The new model reproduced well-known trade-offs between plant traits and can be used to quantify the role of functional diversity in climate change mitigation using different functional diversity scenarios.
Joe R. McNorton and Francesca Di Giuseppe
Biogeosciences, 21, 279–300, https://doi.org/10.5194/bg-21-279-2024, https://doi.org/10.5194/bg-21-279-2024, 2024
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Wildfires have wide-ranging consequences for local communities, air quality and ecosystems. Vegetation amount and moisture state are key components to forecast wildfires. We developed a combined model and satellite framework to characterise vegetation, including the type of fuel, whether it is alive or dead, and its moisture content. The daily data is at high resolution globally (~9 km). Our characteristics correlate with active fire data and can inform fire danger and spread modelling efforts.
Brooke A. Eastman, William R. Wieder, Melannie D. Hartman, Edward R. Brzostek, and William T. Peterjohn
Biogeosciences, 21, 201–221, https://doi.org/10.5194/bg-21-201-2024, https://doi.org/10.5194/bg-21-201-2024, 2024
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We compared soil model performance to data from a long-term nitrogen addition experiment in a forested ecosystem. We found that in order for soil carbon models to accurately predict future forest carbon sequestration, two key processes must respond dynamically to nitrogen availability: (1) plant allocation of carbon to wood versus roots and (2) rates of soil organic matter decomposition. Long-term experiments can help improve our predictions of the land carbon sink and its climate impact.
Jan De Pue, Sebastian Wieneke, Ana Bastos, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Maral Maleki, Fabienne Maignan, Françoise Gellens-Meulenberghs, Ivan Janssens, and Manuela Balzarolo
Biogeosciences, 20, 4795–4818, https://doi.org/10.5194/bg-20-4795-2023, https://doi.org/10.5194/bg-20-4795-2023, 2023
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The gross primary production (GPP) of the terrestrial biosphere is a key source of variability in the global carbon cycle. To estimate this flux, models can rely on remote sensing data (RS-driven), meteorological data (meteo-driven) or a combination of both (hybrid). An intercomparison of 11 models demonstrated that RS-driven models lack the sensitivity to short-term anomalies. Conversely, the simulation of soil moisture dynamics and stress response remains a challenge in meteo-driven models.
Chad A. Burton, Luigi J. Renzullo, Sami W. Rifai, and Albert I. J. M. Van Dijk
Biogeosciences, 20, 4109–4134, https://doi.org/10.5194/bg-20-4109-2023, https://doi.org/10.5194/bg-20-4109-2023, 2023
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Australia's land-based ecosystems play a critical role in controlling the variability in the global land carbon sink. However, uncertainties in the methods used for quantifying carbon fluxes limit our understanding. We develop high-resolution estimates of Australia's land carbon fluxes using machine learning methods and find that Australia is, on average, a stronger carbon sink than previously thought and that the seasonal dynamics of the fluxes differ from those described by other methods.
Yuan Yan, Anne Klosterhalfen, Fernando Moyano, Matthias Cuntz, Andrew C. Manning, and Alexander Knohl
Biogeosciences, 20, 4087–4107, https://doi.org/10.5194/bg-20-4087-2023, https://doi.org/10.5194/bg-20-4087-2023, 2023
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A better understanding of O2 fluxes, their exchange ratios with CO2 and their interrelations with environmental conditions would provide further insights into biogeochemical ecosystem processes. We, therefore, used the multilayer canopy model CANVEG to simulate and analyze the flux exchange for our forest study site for 2012–2016. Based on these simulations, we further successfully tested the application of various micrometeorological methods and the prospects of real O2 flux measurements.
Jie Zhang, Elisabeth Larsen Kolstad, Wenxin Zhang, Iris Vogeler, and Søren O. Petersen
Biogeosciences, 20, 3895–3917, https://doi.org/10.5194/bg-20-3895-2023, https://doi.org/10.5194/bg-20-3895-2023, 2023
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Manure application to agricultural land often results in large and variable N2O emissions. We propose a model with a parsimonious structure to investigate N transformations around such N2O hotspots. The model allows for new detailed insights into the interactions between transport and microbial activities regarding N2O emissions in heterogeneous soil environments. It highlights the importance of solute diffusion to N2O emissions from such hotspots which are often ignored by process-based models.
Tao Chen, Félicien Meunier, Marc Peaucelle, Guoping Tang, Ye Yuan, and Hans Verbeeck
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-140, https://doi.org/10.5194/bg-2023-140, 2023
Revised manuscript accepted for BG
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The Chinese subtropical forest ecosystems are an extremely important component of those global forest ecosystems and are hence crucial for the global carbon cycle and regional climate change. However, there is still a great uncertainty in the relationship between subtropical forest carbon sequestration and its drivers. Here, we provided the first quantitative estimates of the individual and interactive effects of different drivers on the GPP of various subtropical forest types in China.
Jukka Alm, Antti Wall, Jukka-Pekka Myllykangas, Paavo Ojanen, Juha Heikkinen, Helena M. Henttonen, Raija Laiho, Kari Minkkinen, Tarja Tuomainen, and Juha Mikola
Biogeosciences, 20, 3827–3855, https://doi.org/10.5194/bg-20-3827-2023, https://doi.org/10.5194/bg-20-3827-2023, 2023
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In Finland peatlands cover one-third of land area. For half of those, with 4.3 Mha being drained for forestry, Finland reports sinks and sources of greenhouse gases in forest lands on organic soils following its UNFCCC commitment. We describe a new method for compiling soil CO2 balance that follows changes in tree volume, tree harvests and temperature. An increasing trend of emissions from 1.4 to 7.9 Mt CO2 was calculated for drained peatland forest soils in Finland for 1990–2021.
Siqi Li, Bo Zhu, Xunhua Zheng, Pengcheng Hu, Shenghui Han, Jihui Fan, Tao Wang, Rui Wang, Kai Wang, Zhisheng Yao, Chunyan Liu, Wei Zhang, and Yong Li
Biogeosciences, 20, 3555–3572, https://doi.org/10.5194/bg-20-3555-2023, https://doi.org/10.5194/bg-20-3555-2023, 2023
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Physical soil erosion and particulate carbon, nitrogen and phosphorus loss modules were incorporated into the process-oriented hydro-biogeochemical model CNMM-DNDC to realize the accurate simulation of water-induced erosion and subsequent particulate nutrient losses at high spatiotemporal resolution.
Ivan Cornut, Nicolas Delpierre, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, Otavio Campoe, Jose Luiz Stape, Vitoria Fernanda Santos, and Guerric le Maire
Biogeosciences, 20, 3093–3117, https://doi.org/10.5194/bg-20-3093-2023, https://doi.org/10.5194/bg-20-3093-2023, 2023
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Potassium is an essential element for living organisms. Trees are dependent upon this element for certain functions that allow them to build their trunks using carbon dioxide. Using data from experiments in eucalypt plantations in Brazil and a simplified computer model of the plantations, we were able to investigate the effect that a lack of potassium can have on the production of wood. Understanding nutrient cycles is useful to understand the response of forests to environmental change.
Ivan Cornut, Guerric le Maire, Jean-Paul Laclau, Joannès Guillemot, Yann Nouvellon, and Nicolas Delpierre
Biogeosciences, 20, 3119–3135, https://doi.org/10.5194/bg-20-3119-2023, https://doi.org/10.5194/bg-20-3119-2023, 2023
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After simulating the effects of low levels of potassium on the canopy of trees and the uptake of carbon dioxide from the atmosphere by leaves in Part 1, here we tried to simulate the way the trees use the carbon they have acquired and the interaction with the potassium cycle in the tree. We show that the effect of low potassium on the efficiency of the trees in acquiring carbon is enough to explain why they produce less wood when they are in soils with low levels of potassium.
Xiaojuan Yang, Peter Thornton, Daniel Ricciuto, Yilong Wang, and Forrest Hoffman
Biogeosciences, 20, 2813–2836, https://doi.org/10.5194/bg-20-2813-2023, https://doi.org/10.5194/bg-20-2813-2023, 2023
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We evaluated the performance of a land surface model (ELMv1-CNP) that includes both nitrogen (N) and phosphorus (P) limitation on carbon cycle processes. We show that ELMv1-CNP produces realistic estimates of present-day carbon pools and fluxes. We show that global C sources and sinks are significantly affected by P limitation. Our study suggests that introduction of P limitation in land surface models is likely to have substantial consequences for projections of future carbon uptake.
Kevin R. Wilcox, Scott L. Collins, Alan K. Knapp, William Pockman, Zheng Shi, Melinda D. Smith, and Yiqi Luo
Biogeosciences, 20, 2707–2725, https://doi.org/10.5194/bg-20-2707-2023, https://doi.org/10.5194/bg-20-2707-2023, 2023
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The capacity for carbon storage (C capacity) is an attribute that determines how ecosystems store carbon in the future. Here, we employ novel data–model integration techniques to identify the carbon capacity of six grassland sites spanning the US Great Plains. Hot and dry sites had low C capacity due to less plant growth and high turnover of soil C, so they may be a C source in the future. Alternately, cooler and wetter ecosystems had high C capacity, so these systems may be a future C sink.
Ara Cho, Linda M. J. Kooijmans, Kukka-Maaria Kohonen, Richard Wehr, and Maarten C. Krol
Biogeosciences, 20, 2573–2594, https://doi.org/10.5194/bg-20-2573-2023, https://doi.org/10.5194/bg-20-2573-2023, 2023
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Carbonyl sulfide (COS) is a useful constraint for estimating photosynthesis. To simulate COS leaf flux better in the SiB4 model, we propose a novel temperature function for enzyme carbonic anhydrase (CA) activity and optimize conductances using observations. The optimal activity of CA occurs below 40 °C, and Ball–Woodrow–Berry parameters are slightly changed. These reduce/increase uptakes in the tropics/higher latitudes and contribute to resolving discrepancies in the COS global budget.
Yunyao Ma, Bettina Weber, Alexandra Kratz, José Raggio, Claudia Colesie, Maik Veste, Maaike Y. Bader, and Philipp Porada
Biogeosciences, 20, 2553–2572, https://doi.org/10.5194/bg-20-2553-2023, https://doi.org/10.5194/bg-20-2553-2023, 2023
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We found that the modelled annual carbon balance of biocrusts is strongly affected by both the environment (mostly air temperature and CO2 concentration) and physiology, such as temperature response of respiration. However, the relative impacts of these drivers vary across regions with different climates. Uncertainty in driving factors may lead to unrealistic carbon balance estimates, particularly in temperate climates, and may be explained by seasonal variation of physiology due to acclimation.
Alexander J. Norton, A. Anthony Bloom, Nicholas C. Parazoo, Paul A. Levine, Shuang Ma, Renato K. Braghiere, and T. Luke Smallman
Biogeosciences, 20, 2455–2484, https://doi.org/10.5194/bg-20-2455-2023, https://doi.org/10.5194/bg-20-2455-2023, 2023
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This study explores how the representation of leaf phenology affects our ability to predict changes to the carbon balance of land ecosystems. We calibrate a new leaf phenology model against a diverse range of observations at six forest sites, showing that it improves the predictive capability of the processes underlying the ecosystem carbon balance. We then show how changes in temperature and rainfall affect the ecosystem carbon balance with this new model.
Libo Wang, Vivek K. Arora, Paul Bartlett, Ed Chan, and Salvatore R. Curasi
Biogeosciences, 20, 2265–2282, https://doi.org/10.5194/bg-20-2265-2023, https://doi.org/10.5194/bg-20-2265-2023, 2023
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Plant functional types (PFTs) are groups of plant species used to represent vegetation distribution in land surface models. There are large uncertainties associated with existing methods for mapping land cover datasets to PFTs. This study demonstrates how fine-resolution tree cover fraction and land cover datasets can be used to inform the PFT mapping process and reduce the uncertainties. The proposed largely objective method makes it easier to implement new land cover products in models.
Jennifer A. Holm, David M. Medvigy, Benjamin Smith, Jeffrey S. Dukes, Claus Beier, Mikhail Mishurov, Xiangtao Xu, Jeremy W. Lichstein, Craig D. Allen, Klaus S. Larsen, Yiqi Luo, Cari Ficken, William T. Pockman, William R. L. Anderegg, and Anja Rammig
Biogeosciences, 20, 2117–2142, https://doi.org/10.5194/bg-20-2117-2023, https://doi.org/10.5194/bg-20-2117-2023, 2023
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Unprecedented climate extremes (UCEs) are expected to have dramatic impacts on ecosystems. We present a road map of how dynamic vegetation models can explore extreme drought and climate change and assess ecological processes to measure and reduce model uncertainties. The models predict strong nonlinear responses to UCEs. Due to different model representations, the models differ in magnitude and trajectory of forest loss. Therefore, we explore specific plant responses that reflect knowledge gaps.
Veronika Kronnäs, Klas Lucander, Giuliana Zanchi, Nadja Stadlinger, Salim Belyazid, and Cecilia Akselsson
Biogeosciences, 20, 1879–1899, https://doi.org/10.5194/bg-20-1879-2023, https://doi.org/10.5194/bg-20-1879-2023, 2023
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In a future climate, extreme droughts might become more common. Climate change and droughts can have negative effects on soil weathering and plant health.
In this study, climate change effects on weathering were studied on sites in Sweden using the model ForSAFE, a climate change scenario and an extreme drought scenario. The modelling shows that weathering is higher during summer and increases with global warming but that weathering during drought summers can become as low as winter weathering.
Agustín Sarquis and Carlos A. Sierra
Biogeosciences, 20, 1759–1771, https://doi.org/10.5194/bg-20-1759-2023, https://doi.org/10.5194/bg-20-1759-2023, 2023
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Although plant litter is chemically and physically heterogenous and undergoes multiple transformations, models that represent litter dynamics often ignore this complexity. We used a multi-model inference framework to include information content in litter decomposition datasets and studied the time it takes for litter to decompose as measured by the transit time. In arid lands, the median transit time of litter is about 3 years and has a negative correlation with mean annual temperature.
Qi Guan, Jing Tang, Lian Feng, Stefan Olin, and Guy Schurgers
Biogeosciences, 20, 1635–1648, https://doi.org/10.5194/bg-20-1635-2023, https://doi.org/10.5194/bg-20-1635-2023, 2023
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Understanding terrestrial sources of nitrogen is vital to examine lake eutrophication changes. Combining process-based ecosystem modeling and satellite observations, we found that land-leached nitrogen in the Yangtze Plain significantly increased from 1979 to 2018, and terrestrial nutrient sources were positively correlated with eutrophication trends observed in most lakes, demonstrating the necessity of sustainable nitrogen management to control eutrophication.
Vivek K. Arora, Christian Seiler, Libo Wang, and Sian Kou-Giesbrecht
Biogeosciences, 20, 1313–1355, https://doi.org/10.5194/bg-20-1313-2023, https://doi.org/10.5194/bg-20-1313-2023, 2023
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The behaviour of natural systems is now very often represented through mathematical models. These models represent our understanding of how nature works. Of course, nature does not care about our understanding. Since our understanding is not perfect, evaluating models is challenging, and there are uncertainties. This paper illustrates this uncertainty for land models and argues that evaluating models in light of the uncertainty in various components provides useful information.
Liyuan He, Jorge L. Mazza Rodrigues, Melanie A. Mayes, Chun-Ta Lai, David A. Lipson, and Xiaofeng Xu
Biogeosciences Discuss., https://doi.org/10.5194/bg-2023-15, https://doi.org/10.5194/bg-2023-15, 2023
Revised manuscript accepted for BG
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The microbial-explicit model – CLM-Microbe – was first applied to investigate the carbon cycle in terrestrial ecosystems. The simulated carbon storages and fluxes are consistent with previous estimates. The bacterial and fungal biomass carbon showed increasing trends from 1901 to 2016, with large spatial variations. The long-term global estimation of microbial dynamics provides a quantitive understanding of microbial contributions to the global carbon cycle.
Benjamin S. Felzer
Biogeosciences, 20, 573–587, https://doi.org/10.5194/bg-20-573-2023, https://doi.org/10.5194/bg-20-573-2023, 2023
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The future of the terrestrial carbon sink depends upon the legacy of past land use, which determines the stand age of the forest and nutrient levels in the soil, both of which affect vegetation growth. This study uses a modeling approach to determine the effects of land-use legacy in the conterminous US from 1750 to 2099. Not accounting for land legacy results in a low carbon sink and high biomass, while water variables are not as highly affected.
Bailu Zhao and Qianlai Zhuang
Biogeosciences, 20, 251–270, https://doi.org/10.5194/bg-20-251-2023, https://doi.org/10.5194/bg-20-251-2023, 2023
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In this study, we use a process-based model to simulate the northern peatland's C dynamics in response to future climate change during 1990–2300. Northern peatlands are projected to be a C source under all climate scenarios except for the mildest one before 2100 and C sources under all scenarios afterwards.
We find northern peatlands are a C sink until pan-Arctic annual temperature reaches −2.09 to −2.89 °C. This study emphasizes the vulnerability of northern peatlands to climate change.
Lin Yu, Silvia Caldararu, Bernhard Ahrens, Thomas Wutzler, Marion Schrumpf, Julian Helfenstein, Chiara Pistocchi, and Sönke Zaehle
Biogeosciences, 20, 57–73, https://doi.org/10.5194/bg-20-57-2023, https://doi.org/10.5194/bg-20-57-2023, 2023
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In this study, we addressed a key weakness in current ecosystem models regarding the phosphorus exchange in the soil and developed a new scheme to describe this process. We showed that the new scheme improved the model performance for plant productivity, soil organic carbon, and soil phosphorus content at five beech forest sites in Germany. We claim that this new model could be used as a better tool to study ecosystems under future climate change, particularly phosphorus-limited systems.
Bimal K. Bhattacharya, Kaniska Mallick, Devansh Desai, Ganapati S. Bhat, Ross Morrison, Jamie R. Clevery, William Woodgate, Jason Beringer, Kerry Cawse-Nicholson, Siyan Ma, Joseph Verfaillie, and Dennis Baldocchi
Biogeosciences, 19, 5521–5551, https://doi.org/10.5194/bg-19-5521-2022, https://doi.org/10.5194/bg-19-5521-2022, 2022
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Evaporation retrieval in heterogeneous ecosystems is challenging due to empirical estimation of ground heat flux and complex parameterizations of conductances. We developed a parameter-sparse coupled ground heat flux-evaporation model and tested it across different limits of water stress and vegetation fraction in the Northern/Southern Hemisphere. The model performed particularly well in the savannas and showed good potential for evaporative stress monitoring from thermal infrared satellites.
Jie Zhang, Wenxin Zhang, Per-Erik Jansson, and Søren O. Petersen
Biogeosciences, 19, 4811–4832, https://doi.org/10.5194/bg-19-4811-2022, https://doi.org/10.5194/bg-19-4811-2022, 2022
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In this study, we relied on a properly controlled laboratory experiment to test the model’s capability of simulating the dominant microbial processes and the emissions of one greenhouse gas (nitrous oxide, N2O) from agricultural soils. This study reveals important processes and parameters that regulate N2O emissions in the investigated model framework and also suggests future steps of model development, which have implications on the broader communities of ecosystem modelers.
Jan De Pue, José Miguel Barrios, Liyang Liu, Philippe Ciais, Alirio Arboleda, Rafiq Hamdi, Manuela Balzarolo, Fabienne Maignan, and Françoise Gellens-Meulenberghs
Biogeosciences, 19, 4361–4386, https://doi.org/10.5194/bg-19-4361-2022, https://doi.org/10.5194/bg-19-4361-2022, 2022
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The functioning of ecosystems involves numerous biophysical processes which interact with each other. Land surface models (LSMs) are used to describe these processes and form an essential component of climate models. In this paper, we evaluate the performance of three LSMs and their interactions with soil moisture and vegetation. Though we found room for improvement in the simulation of soil moisture and drought stress, the main cause of errors was related to the simulated growth of vegetation.
Jarmo Mäkelä, Laura Arppe, Hannu Fritze, Jussi Heinonsalo, Kristiina Karhu, Jari Liski, Markku Oinonen, Petra Straková, and Toni Viskari
Biogeosciences, 19, 4305–4313, https://doi.org/10.5194/bg-19-4305-2022, https://doi.org/10.5194/bg-19-4305-2022, 2022
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Soils account for the largest share of carbon found in terrestrial ecosystems, and accurate depiction of soil carbon decomposition is essential in understanding how permanent these carbon storages are. We present a straightforward way to include carbon isotope concentrations into soil decomposition and carbon storages for the Yasso model, which enables the model to use 13C as a natural tracer to track changes in the underlying soil organic matter decomposition.
Vasileios Myrgiotis, Thomas Luke Smallman, and Mathew Williams
Biogeosciences, 19, 4147–4170, https://doi.org/10.5194/bg-19-4147-2022, https://doi.org/10.5194/bg-19-4147-2022, 2022
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This study shows that livestock grazing and grass cutting can determine whether a grassland is adding (source) or removing (sink) carbon (C) to/from the atmosphere. The annual C balance of 1855 managed grassland fields in Great Britain was quantified for 2017–2018 using process modelling and earth observation data. The examined fields were, on average, small C sinks, but the summer drought of 2018 led to a 9-fold increase in the number of fields that became C sources in 2018 compared to 2017.
J. Robert Logan, Kathe E. Todd-Brown, Kathryn M. Jacobson, Peter J. Jacobson, Roland Vogt, and Sarah E. Evans
Biogeosciences, 19, 4129–4146, https://doi.org/10.5194/bg-19-4129-2022, https://doi.org/10.5194/bg-19-4129-2022, 2022
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Understanding how plants decompose is important for understanding where the atmospheric CO2 they absorb ends up after they die. In forests, decomposition is controlled by rain but not in deserts. We performed a 2.5-year study in one of the driest places on earth (the Namib desert in southern Africa) and found that fog and dew, not rainfall, closely controlled how quickly plants decompose. We also created a model to help predict decomposition in drylands with lots of fog and/or dew.
Carlos A. Sierra, Verónika Ceballos-Núñez, Henrik Hartmann, David Herrera-Ramírez, and Holger Metzler
Biogeosciences, 19, 3727–3738, https://doi.org/10.5194/bg-19-3727-2022, https://doi.org/10.5194/bg-19-3727-2022, 2022
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Empirical work that estimates the age of respired CO2 from vegetation tissue shows that it may take from years to decades to respire previously produced photosynthates. However, many ecosystem models represent respiration processes in a form that cannot reproduce these observations. In this contribution, we attempt to provide compelling evidence, based on recent research, with the aim to promote a change in the predominant paradigm implemented in ecosystem models.
César Dionisio Jiménez-Rodríguez, Mauro Sulis, and Stanislaus Schymanski
Biogeosciences, 19, 3395–3423, https://doi.org/10.5194/bg-19-3395-2022, https://doi.org/10.5194/bg-19-3395-2022, 2022
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Vegetation relies on soil water reservoirs during dry periods. However, when this source is depleted, the plants may access water stored deeper in the rocks. This rock moisture contribution is usually omitted in large-scale models, which affects modeled plant water use during dry periods. Our study illustrates that including this additional source of water in the Community Land Model improves the model's ability to reproduce observed plant water use at seasonally dry sites.
Marco Carozzi, Raphaël Martin, Katja Klumpp, and Raia Silvia Massad
Biogeosciences, 19, 3021–3050, https://doi.org/10.5194/bg-19-3021-2022, https://doi.org/10.5194/bg-19-3021-2022, 2022
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Crop and grassland production indicates a strong reduction due to the shortening of the length of the growing cycle associated with rising temperatures. Greenhouse gas emissions will increase exponentially over the century, often exceeding the CO2 accumulation of agro-ecosystems. Water demand will double in the next few decades, whereas the benefits in terms of yield will not fill the gap of C losses due to climate perturbation. Climate change will have a regionally distributed effect in the EU.
Anthony Mucia, Bertrand Bonan, Clément Albergel, Yongjun Zheng, and Jean-Christophe Calvet
Biogeosciences, 19, 2557–2581, https://doi.org/10.5194/bg-19-2557-2022, https://doi.org/10.5194/bg-19-2557-2022, 2022
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For the first time, microwave vegetation optical depth data are assimilated in a land surface model in order to analyze leaf area index and root zone soil moisture. The advantage of microwave products is the higher observation frequency. A large variety of independent datasets are used to verify the added value of the assimilation. It is shown that the assimilation is able to improve the representation of soil moisture, vegetation conditions, and terrestrial water and carbon fluxes.
Camille Abadie, Fabienne Maignan, Marine Remaud, Jérôme Ogée, J. Elliott Campbell, Mary E. Whelan, Florian Kitz, Felix M. Spielmann, Georg Wohlfahrt, Richard Wehr, Wu Sun, Nina Raoult, Ulli Seibt, Didier Hauglustaine, Sinikka T. Lennartz, Sauveur Belviso, David Montagne, and Philippe Peylin
Biogeosciences, 19, 2427–2463, https://doi.org/10.5194/bg-19-2427-2022, https://doi.org/10.5194/bg-19-2427-2022, 2022
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A better constraint of the components of the carbonyl sulfide (COS) global budget is needed to exploit its potential as a proxy of gross primary productivity. In this study, we compare two representations of oxic soil COS fluxes, and we develop an approach to represent anoxic soil COS fluxes in a land surface model. We show the importance of atmospheric COS concentration variations on oxic soil COS fluxes and provide new estimates for oxic and anoxic soil contributions to the COS global budget.
Jianyong Ma, Sam S. Rabin, Peter Anthoni, Anita D. Bayer, Sylvia S. Nyawira, Stefan Olin, Longlong Xia, and Almut Arneth
Biogeosciences, 19, 2145–2169, https://doi.org/10.5194/bg-19-2145-2022, https://doi.org/10.5194/bg-19-2145-2022, 2022
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Improved agricultural management plays a vital role in protecting soils from degradation in eastern Africa. We simulated the impacts of seven management practices on soil carbon pools, nitrogen loss, and crop yield under different climate scenarios in this region. This study highlights the possibilities of conservation agriculture when targeting long-term environmental sustainability and food security in crop ecosystems, particularly for those with poor soil conditions in tropical climates.
Elisabeth Tschumi, Sebastian Lienert, Karin van der Wiel, Fortunat Joos, and Jakob Zscheischler
Biogeosciences, 19, 1979–1993, https://doi.org/10.5194/bg-19-1979-2022, https://doi.org/10.5194/bg-19-1979-2022, 2022
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Droughts and heatwaves are expected to occur more often in the future, but their effects on land vegetation and the carbon cycle are poorly understood. We use six climate scenarios with differing extreme occurrences and a vegetation model to analyse these effects. Tree coverage and associated plant productivity increase under a climate with no extremes. Frequent co-occurring droughts and heatwaves decrease plant productivity more than the combined effects of single droughts or heatwaves.
Stephanie G. Stettz, Nicholas C. Parazoo, A. Anthony Bloom, Peter D. Blanken, David R. Bowling, Sean P. Burns, Cédric Bacour, Fabienne Maignan, Brett Raczka, Alexander J. Norton, Ian Baker, Mathew Williams, Mingjie Shi, Yongguang Zhang, and Bo Qiu
Biogeosciences, 19, 541–558, https://doi.org/10.5194/bg-19-541-2022, https://doi.org/10.5194/bg-19-541-2022, 2022
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Uncertainty in the response of photosynthesis to temperature poses a major challenge to predicting the response of forests to climate change. In this paper, we study how photosynthesis in a mountainous evergreen forest is limited by temperature. This study highlights that cold temperature is a key factor that controls spring photosynthesis. Including the cold-temperature limitation in an ecosystem model improved its ability to simulate spring photosynthesis.
Eva Kanari, Lauric Cécillon, François Baudin, Hugues Clivot, Fabien Ferchaud, Sabine Houot, Florent Levavasseur, Bruno Mary, Laure Soucémarianadin, Claire Chenu, and Pierre Barré
Biogeosciences, 19, 375–387, https://doi.org/10.5194/bg-19-375-2022, https://doi.org/10.5194/bg-19-375-2022, 2022
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Soil organic carbon (SOC) is crucial for climate regulation, soil quality, and food security. Predicting its evolution over the next decades is key for appropriate land management policies. However, SOC projections lack accuracy. Here we show for the first time that PARTYSOC, an approach combining thermal analysis and machine learning optimizes the accuracy of SOC model simulations at independent sites. This method can be applied at large scales, improving SOC projections on a continental scale.
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