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Biogeosciences An interactive open-access journal of the European Geosciences Union

Volume 10, issue 11

Volume 10, issue 11

01 Nov 2013
Effects of topography, soil type and forest age on the frequency and size distribution of canopy gap disturbances in a tropical forest
E. Lobo and J. W. Dalling
Biogeosciences, 10, 6769-6781, https://doi.org/10.5194/bg-10-6769-2013, 2013
01 Nov 2013
Interannual variation in summer N2O concentration in the hypoxic region of the northern Gulf of Mexico, 1985–2007
I.-N. Kim, K. Lee, H. W. Bange, and A. M. Macdonald
Biogeosciences, 10, 6783-6792, https://doi.org/10.5194/bg-10-6783-2013, 2013
01 Nov 2013
Photooxidation of dimethylsulfide (DMS) in the Canadian Arctic
A. Taalba, H. Xie, M. G. Scarratt, S. Bélanger, and M. Levasseur
Biogeosciences, 10, 6793-6806, https://doi.org/10.5194/bg-10-6793-2013, 2013
01 Nov 2013
Calcification responses of symbiotic and aposymbiotic corals to near-future levels of ocean acidification
S. Ohki, T. Irie, M. Inoue, K. Shinmen, H. Kawahata, T. Nakamura, A. Kato, Y. Nojiri, A. Suzuki, K. Sakai, and R. van Woesik
Biogeosciences, 10, 6807-6814, https://doi.org/10.5194/bg-10-6807-2013, 2013
01 Nov 2013
Integrating O3 influences on terrestrial processes: photosynthetic and stomatal response data available for regional and global modeling
D. Lombardozzi, J. P. Sparks, and G. Bonan
Biogeosciences, 10, 6815-6831, https://doi.org/10.5194/bg-10-6815-2013, 2013
02 Nov 2013
Phytoplankton competition during the spring bloom in four plankton functional type models
T. Hashioka, M. Vogt, Y. Yamanaka, C. Le Quéré, E. T. Buitenhuis, M. N. Aita, S. Alvain, L. Bopp, T. Hirata, I. Lima, S. Sailley, and S. C. Doney
Biogeosciences, 10, 6833-6850, https://doi.org/10.5194/bg-10-6833-2013, 2013
02 Nov 2013
Anammox, denitrification and dissimilatory nitrate reduction to ammonium in the East China Sea sediment
G. D. Song, S. M. Liu, H. Marchant, M. M. M. Kuypers, and G. Lavik
Biogeosciences, 10, 6851-6864, https://doi.org/10.5194/bg-10-6851-2013, 2013
02 Nov 2013
Comparison between eddy covariance and automatic chamber techniques for measuring net ecosystem exchange of carbon dioxide in cotton and wheat fields
K. Wang, C. Liu, X. Zheng, M. Pihlatie, B. Li, S. Haapanala, T. Vesala, H. Liu, Y. Wang, G. Liu, and F. Hu
Biogeosciences, 10, 6865-6877, https://doi.org/10.5194/bg-10-6865-2013, 2013
02 Nov 2013
Sink or link? The bacterial role in benthic carbon cycling in the Arabian Sea's oxygen minimum zone
L. Pozzato, D. Van Oevelen, L. Moodley, K. Soetaert, and J. J. Middelburg
Biogeosciences, 10, 6879-6891, https://doi.org/10.5194/bg-10-6879-2013, 2013
04 Nov 2013
Evaluating the agreement between measurements and models of net ecosystem exchange at different times and timescales using wavelet coherence: an example using data from the North American Carbon Program Site-Level Interim Synthesis
P. C. Stoy, M. C. Dietze, A. D. Richardson, R. Vargas, A. G. Barr, R. S. Anderson, M. A. Arain, I. T. Baker, T. A. Black, J. M. Chen, R. B. Cook, C. M. Gough, R. F. Grant, D. Y. Hollinger, R. C. Izaurralde, C. J. Kucharik, P. Lafleur, B. E. Law, S. Liu, E. Lokupitiya, Y. Luo, J. W. Munger, C. Peng, B. Poulter, D. T. Price, D. M. Ricciuto, W. J. Riley, A. K. Sahoo, K. Schaefer, C. R. Schwalm, H. Tian, H. Verbeeck, and E. Weng
Biogeosciences, 10, 6893-6909, https://doi.org/10.5194/bg-10-6893-2013, 2013
04 Nov 2013
Dynamics of dissolved inorganic carbon and aquatic metabolism in the Tana River basin, Kenya
F. Tamooh, A. V. Borges, F. J. R. Meysman, K. Van Den Meersche, F. Dehairs, R. Merckx, and S. Bouillon
Biogeosciences, 10, 6911-6928, https://doi.org/10.5194/bg-10-6911-2013, 2013
04 Nov 2013
Ratios among atmospheric trace gases together with winds imply exploitable information for bird navigation: a model elucidating experimental results
H. G. Wallraff
Biogeosciences, 10, 6929-6943, https://doi.org/10.5194/bg-10-6929-2013, 2013
04 Nov 2013
Depth-dependent molecular composition and photo-reactivity of dissolved organic matter in a boreal lake under winter and summer conditions
M. Gonsior, P. Schmitt-Kopplin, and D. Bastviken
Biogeosciences, 10, 6945-6956, https://doi.org/10.5194/bg-10-6945-2013, 2013
04 Nov 2013
Multiresolution quantification of deciduousness in West-Central African forests
G. Viennois, N. Barbier, I. Fabre, and P. Couteron
Biogeosciences, 10, 6957-6967, https://doi.org/10.5194/bg-10-6957-2013, 2013
05 Nov 2013
Bioavailability of riverine dissolved organic matter in three Baltic Sea estuaries and the effect of catchment land use
E. Asmala, R. Autio, H. Kaartokallio, L. Pitkänen, C. A. Stedmon, and D. N. Thomas
Biogeosciences, 10, 6969-6986, https://doi.org/10.5194/bg-10-6969-2013, 2013
05 Nov 2013
Estimating global carbon uptake by lichens and bryophytes with a process-based model
P. Porada, B. Weber, W. Elbert, U. Pöschl, and A. Kleidon
Biogeosciences, 10, 6989-7033, https://doi.org/10.5194/bg-10-6989-2013, 2013
06 Nov 2013
Sea–air CO2 fluxes in the Indian Ocean between 1990 and 2009
V. V. S. S. Sarma, A. Lenton, R. M. Law, N. Metzl, P. K. Patra, S. Doney, I. D. Lima, E. Dlugokencky, M. Ramonet, and V. Valsala
Biogeosciences, 10, 7035-7052, https://doi.org/10.5194/bg-10-7035-2013, 2013
07 Nov 2013
Soil organic carbon dynamics of black locust plantations in the middle Loess Plateau area of China
N. Lu, J. Liski, R. Y. Chang, A. Akujärvi, X. Wu, T. T. Jin, Y. F. Wang, and B. J. Fu
Biogeosciences, 10, 7053-7063, https://doi.org/10.5194/bg-10-7053-2013, 2013
07 Nov 2013
Prominent bacterial heterotrophy and sources of 13C-depleted fatty acids to the interior Canada Basin
S. R. Shah, D. R. Griffith, V. Galy, A. P. McNichol, and T. I. Eglinton
Biogeosciences, 10, 7065-7080, https://doi.org/10.5194/bg-10-7065-2013, 2013
08 Nov 2013
Contribution to a bio-optical model for remote sensing of Lena River water
H. Örek, R. Doerffer, R. Röttgers, M. Boersma, and K. H. Wiltshire
Biogeosciences, 10, 7081-7094, https://doi.org/10.5194/bg-10-7081-2013, 2013
08 Nov 2013
Examining soil carbon uncertainty in a global model: response of microbial decomposition to temperature, moisture and nutrient limitation
J.-F. Exbrayat, A. J. Pitman, Q. Zhang, G. Abramowitz, and Y.-P. Wang
Biogeosciences, 10, 7095-7108, https://doi.org/10.5194/bg-10-7095-2013, 2013
10 Nov 2013
The effect of vertically resolved soil biogeochemistry and alternate soil C and N models on C dynamics of CLM4
C. D. Koven, W. J. Riley, Z. M. Subin, J. Y. Tang, M. S. Torn, W. D. Collins, G. B. Bonan, D. M. Lawrence, and S. C. Swenson
Biogeosciences, 10, 7109-7131, https://doi.org/10.5194/bg-10-7109-2013, 2013
10 Nov 2013
Understanding soil erosion impacts in temperate agroecosystems: bridging the gap between geomorphology and soil ecology using nematodes as a model organism
C. Baxter, J. S. Rowan, B. M. McKenzie, and R. Neilson
Biogeosciences, 10, 7133-7145, https://doi.org/10.5194/bg-10-7133-2013, 2013
11 Nov 2013
Nitrogen deposition: how important is it for global terrestrial carbon uptake?
G. Bala, N. Devaraju, R. K. Chaturvedi, K. Caldeira, and R. Nemani
Biogeosciences, 10, 7147-7160, https://doi.org/10.5194/bg-10-7147-2013, 2013
12 Nov 2013
Macrofaunal colonization across the Indian margin oxygen minimum zone
L. A. Levin, A. L. McGregor, G. F. Mendoza, C. Woulds, P. Cross, U. Witte, A. J. Gooday, G. Cowie, and H. Kitazato
Biogeosciences, 10, 7161-7177, https://doi.org/10.5194/bg-10-7161-2013, 2013
12 Nov 2013
A nitrogen budget for the Strait of Georgia, British Columbia, with emphasis on particulate nitrogen and dissolved inorganic nitrogen
J. N. Sutton, S. C. Johannessen, and R. W. Macdonald
Biogeosciences, 10, 7179-7194, https://doi.org/10.5194/bg-10-7179-2013, 2013
12 Nov 2013
Different seasonality of pelagic and benthic Thaumarchaeota in the North Sea
N. J. Bale, L. Villanueva, E. C. Hopmans, S. Schouten, and J. S. Sinninghe Damsté
Biogeosciences, 10, 7195-7206, https://doi.org/10.5194/bg-10-7195-2013, 2013
12 Nov 2013
Photobleaching as a factor controlling spectral characteristics of chromophoric dissolved organic matter in open ocean
Y. Yamashita, Y. Nosaka, K. Suzuki, H. Ogawa, K. Takahashi, and H. Saito
Biogeosciences, 10, 7207-7217, https://doi.org/10.5194/bg-10-7207-2013, 2013
12 Nov 2013
Modeling ocean circulation and biogeochemical variability in the Gulf of Mexico
Z. Xue, R. He, K. Fennel, W.-J. Cai, S. Lohrenz, and C. Hopkinson
Biogeosciences, 10, 7219-7234, https://doi.org/10.5194/bg-10-7219-2013, 2013
12 Nov 2013
Downward fluxes of sinking particulate matter in the deep Ionian Sea (NESTOR site), eastern Mediterranean: seasonal and interannual variability
S. Stavrakakis, A. Gogou, E. Krasakopoulou, A. P. Karageorgis, H. Kontoyiannis, G. Rousakis, D. Velaoras, L. Perivoliotis, G. Kambouri, I. Stavrakaki, and V. Lykousis
Biogeosciences, 10, 7235-7254, https://doi.org/10.5194/bg-10-7235-2013, 2013
13 Nov 2013
The effects of intermittent exposure to low-pH and low-oxygen conditions on survival and growth of juvenile red abalone
T. W. Kim, J. P. Barry, and F. Micheli
Biogeosciences, 10, 7255-7262, https://doi.org/10.5194/bg-10-7255-2013, 2013
13 Nov 2013
Phytoplankton community structure in the Lena Delta (Siberia, Russia) in relation to hydrography
A. C. Kraberg, E. Druzhkova, B. Heim, M. J. G. Loeder, and K. H. Wiltshire
Biogeosciences, 10, 7263-7277, https://doi.org/10.5194/bg-10-7263-2013, 2013
14 Nov 2013
Finding immune gene expression differences induced by marine bacterial pathogens in the Deep-sea hydrothermal vent mussel Bathymodiolus azoricus
E. Martins, A. Queiroz, R. Serrão Santos, and R. Bettencourt
Biogeosciences, 10, 7279-7291, https://doi.org/10.5194/bg-10-7279-2013, 2013
14 Nov 2013
On the role of mesoscale eddies for the biological productivity and biogeochemistry in the eastern tropical Pacific Ocean off Peru
L. Stramma, H. W. Bange, R. Czeschel, A. Lorenzo, and M. Frank
Biogeosciences, 10, 7293-7306, https://doi.org/10.5194/bg-10-7293-2013, 2013
14 Nov 2013
Asynchronism in leaf and wood production in tropical forests: a study combining satellite and ground-based measurements
F. Wagner, V. Rossi, C. Stahl, D. Bonal, and B. Hérault
Biogeosciences, 10, 7307-7321, https://doi.org/10.5194/bg-10-7307-2013, 2013
15 Nov 2013
Solute-specific scaling of inorganic nitrogen and phosphorus uptake in streams
R. O. Hall Jr., M. A. Baker, E. J. Rosi-Marshall, J. L. Tank, and J. D. Newbold
Biogeosciences, 10, 7323-7331, https://doi.org/10.5194/bg-10-7323-2013, 2013
15 Nov 2013
Strong stimulation of N2 fixation in oligotrophic Mediterranean Sea: results from dust addition in large in situ mesocosms
C. Ridame, C. Guieu, and S. L'Helguen
Biogeosciences, 10, 7333-7346, https://doi.org/10.5194/bg-10-7333-2013, 2013
15 Nov 2013
Southern Hemisphere imprint for Indo-Asian summer monsoons during the last glacial period as revealed by Arabian Sea productivity records
T. Caley, S. Zaragosi, J. Bourget, P. Martinez, B. Malaizé, F. Eynaud, L. Rossignol, T. Garlan, and N. Ellouz-Zimmermann
Biogeosciences, 10, 7347-7359, https://doi.org/10.5194/bg-10-7347-2013, 2013
18 Nov 2013
Effects of belowground litter addition, increased precipitation and clipping on soil carbon and nitrogen mineralization in a temperate steppe
L. Ma, C. Guo, X. Xin, S. Yuan, and R. Wang
Biogeosciences, 10, 7361-7372, https://doi.org/10.5194/bg-10-7361-2013, 2013
18 Nov 2013
Long-term trends in ocean plankton production and particle export between 1960–2006
C. Laufkötter, M. Vogt, and N. Gruber
Biogeosciences, 10, 7373-7393, https://doi.org/10.5194/bg-10-7373-2013, 2013
19 Nov 2013
Measurements of nitrite production in and around the primary nitrite maximum in the central California Current
A. E. Santoro, C. M. Sakamoto, J. M. Smith, J. N. Plant, A. L. Gehman, A. Z. Worden, K. S. Johnson, C. A. Francis, and K. L. Casciotti
Biogeosciences, 10, 7395-7410, https://doi.org/10.5194/bg-10-7395-2013, 2013
19 Nov 2013
A short history of ocean acidification science in the 20th century: a chemist's view
P. G. Brewer
Biogeosciences, 10, 7411-7422, https://doi.org/10.5194/bg-10-7411-2013, 2013
19 Nov 2013
Variability of above-ground litter inputs alters soil physicochemical and biological processes: a meta-analysis of litterfall-manipulation experiments
S. Xu, L. L. Liu, and E. J. Sayer
Biogeosciences, 10, 7423-7433, https://doi.org/10.5194/bg-10-7423-2013, 2013
19 Nov 2013
Subcritical water extraction to isolate kinetically different soil nitrogen fractions
S. Sleutel, M. A. Kader, K. Demeestere, C. Walgraeve, J. Dewulf, and S. De Neve
Biogeosciences, 10, 7435-7447, https://doi.org/10.5194/bg-10-7435-2013, 2013
20 Nov 2013
Inter-annual variation of chlorophyll in the northern South China Sea observed at the SEATS Station and its asymmetric responses to climate oscillation
K.-K. Liu, L.-W. Wang, M. Dai, C.-M. Tseng, Y. Yang, C.-H. Sui, L. Oey, K.-Y. Tseng, and S.-M. Huang
Biogeosciences, 10, 7449-7462, https://doi.org/10.5194/bg-10-7449-2013, 2013
21 Nov 2013
Foraminiferal survival after long-term in situ experimentally induced anoxia
D. Langlet, E. Geslin, C. Baal, E. Metzger, F. Lejzerowicz, B. Riedel, M. Zuschin, J. Pawlowski, M. Stachowitsch, and F. J. Jorissen
Biogeosciences, 10, 7463-7480, https://doi.org/10.5194/bg-10-7463-2013, 2013
21 Nov 2013
Medium-term exposure of the North Atlantic copepod Calanus finmarchicus (Gunnerus, 1770) to CO2-acidified seawater: effects on survival and development
S. A. Pedersen, B. H. Hansen, D. Altin, and A. J. Olsen
Biogeosciences, 10, 7481-7491, https://doi.org/10.5194/bg-10-7481-2013, 2013
21 Nov 2013
Influence of physical and biological processes on the seasonal cycle of biogenic flux in the equatorial Indian Ocean
P. J. Vidya, S. Prasanna Kumar, M. Gauns, A. Verenkar, D. Unger, and V. Ramaswamy
Biogeosciences, 10, 7493-7507, https://doi.org/10.5194/bg-10-7493-2013, 2013
21 Nov 2013
Vertical activity distribution of dissimilatory nitrate reduction in coastal marine sediments
A. Behrendt, D. de Beer, and P. Stief
Biogeosciences, 10, 7509-7523, https://doi.org/10.5194/bg-10-7509-2013, 2013
21 Nov 2013
Enhancement of photosynthetic carbon assimilation efficiency by phytoplankton in the future coastal ocean
J.-H. Kim, K. Y. Kim, E. J. Kang, K. Lee, J.-M. Kim, K.-T. Park, K. Shin, B. Hyun, and H. J. Jeong
Biogeosciences, 10, 7525-7535, https://doi.org/10.5194/bg-10-7525-2013, 2013
22 Nov 2013
Regulation of CO2 emissions from temperate streams and reservoirs
S. Halbedel and M. Koschorreck
Biogeosciences, 10, 7539-7551, https://doi.org/10.5194/bg-10-7539-2013, 2013
22 Nov 2013
Distribution of phytoplankton functional types in high-nitrate, low-chlorophyll waters in a new diagnostic ecological indicator model
A. P. Palacz, M. A. St. John, R. J. W. Brewin, T. Hirata, and W. W. Gregg
Biogeosciences, 10, 7553-7574, https://doi.org/10.5194/bg-10-7553-2013, 2013
22 Nov 2013
Pan-Arctic linkages between snow accumulation and growing-season air temperature, soil moisture and vegetation
K. A. Luus, Y. Gel, J. C. Lin, R. E. J. Kelly, and C. R. Duguay
Biogeosciences, 10, 7575-7597, https://doi.org/10.5194/bg-10-7575-2013, 2013
22 Nov 2013
Impacts of food availability and pCO2 on planulation, juvenile survival, and calcification of the azooxanthellate scleractinian coral Balanophyllia elegans
E. D. Crook, H. Cooper, D. C. Potts, T. Lambert, and A. Paytan
Biogeosciences, 10, 7599-7608, https://doi.org/10.5194/bg-10-7599-2013, 2013
22 Nov 2013
Benthic fluxes of dissolved organic nitrogen in the lower St. Lawrence estuary and implications for selective organic matter degradation
M. Alkhatib, P. A. del Giorgio, Y. Gelinas, and M. F. Lehmann
Biogeosciences, 10, 7609-7622, https://doi.org/10.5194/bg-10-7609-2013, 2013
22 Nov 2013
Comment on "Soil CO2, CH4 and N2O fluxes from an afforested lowland raised peat bog in Scotland: implications for drainage and restoration" by Yamulki et al. (2013)
R. R. E. Artz, S. J. Chapman, M. Saunders, C. D. Evans, and R. B. Matthews
Biogeosciences, 10, 7623-7630, https://doi.org/10.5194/bg-10-7623-2013, 2013
25 Nov 2013
Comparison of inorganic nitrogen uptake dynamics following snowmelt and at peak biomass in subalpine grasslands
N. Legay, F. Grassein, T. M. Robson, E. Personeni, M.-P. Bataillé, S. Lavorel, and J.-C. Clément
Biogeosciences, 10, 7631-7645, https://doi.org/10.5194/bg-10-7631-2013, 2013
26 Nov 2013
Short-term post-mortality scavenging and longer term recovery after anoxia in the northern Adriatic Sea
M. Blasnig, B. Riedel, L. Schiemer, M. Zuschin, and M. Stachowitsch
Biogeosciences, 10, 7647-7659, https://doi.org/10.5194/bg-10-7647-2013, 2013
27 Nov 2013
Arctic gypsum endoliths: a biogeochemical characterization of a viable and active microbial community
L. A. Ziolkowski, N. C. S. Mykytczuk, C. R. Omelon, H. Johnson, L. G. Whyte, and G. F. Slater
Biogeosciences, 10, 7661-7675, https://doi.org/10.5194/bg-10-7661-2013, 2013
27 Nov 2013
Phosphate monoesterase and diesterase activities in the North and South Pacific Ocean
M. Sato, R. Sakuraba, and F. Hashihama
Biogeosciences, 10, 7677-7688, https://doi.org/10.5194/bg-10-7677-2013, 2013
27 Nov 2013
Amino acid composition and δ15N of suspended matter in the Arabian Sea: implications for organic matter sources and degradation
B. Gaye, B. Nagel, K. Dähnke, T. Rixen, N. Lahajnar, and K.-C. Emeis
Biogeosciences, 10, 7689-7702, https://doi.org/10.5194/bg-10-7689-2013, 2013
28 Nov 2013
Modelling changes in nitrogen cycling to sustain increases in forest productivity under elevated atmospheric CO2 and contrasting site conditions
R. F. Grant
Biogeosciences, 10, 7703-7721, https://doi.org/10.5194/bg-10-7703-2013, 2013
28 Nov 2013
A novel estimate of ocean oxygen utilisation points to a reduced rate of respiration in the ocean interior
O. Duteil, W. Koeve, A. Oschlies, D. Bianchi, E. Galbraith, I. Kriest, and R. Matear
Biogeosciences, 10, 7723-7738, https://doi.org/10.5194/bg-10-7723-2013, 2013
28 Nov 2013
A fertile peatland forest does not constitute a major greenhouse gas sink
A. Meyer, L. Tarvainen, A. Nousratpour, R. G. Björk, M. Ernfors, A. Grelle, Å Kasimir Klemedtsson, A. Lindroth, M. Räntfors, T. Rütting, G. Wallin, P. Weslien, and L. Klemedtsson
Biogeosciences, 10, 7739-7758, https://doi.org/10.5194/bg-10-7739-2013, 2013
29 Nov 2013
Soil physical restrictions and hydrology regulate stand age and wood biomass turnover rates of Purus–Madeira interfluvial wetlands in Amazonia
B. B. L. Cintra, J. Schietti, T. Emillio, D. Martins, G. Moulatlet, P. Souza, C. Levis, C. A. Quesada, and J. Schöngart
Biogeosciences, 10, 7759-7774, https://doi.org/10.5194/bg-10-7759-2013, 2013
29 Nov 2013
Seasonal variations of sea–air CO2 fluxes in the largest tropical marginal sea (South China Sea) based on multiple-year underway measurements
W.-D. Zhai, M.-H. Dai, B.-S. Chen, X.-H. Guo, Q. Li, S.-L. Shang, C.-Y. Zhang, W.-J. Cai, and D.-X. Wang
Biogeosciences, 10, 7775-7791, https://doi.org/10.5194/bg-10-7775-2013, 2013
29 Nov 2013
A neural network-based estimate of the seasonal to inter-annual variability of the Atlantic Ocean carbon sink
P. Landschützer, N. Gruber, D. C. E. Bakker, U. Schuster, S. Nakaoka, M. R. Payne, T. P. Sasse, and J. Zeng
Biogeosciences, 10, 7793-7815, https://doi.org/10.5194/bg-10-7793-2013, 2013
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