Journal cover Journal topic
Biogeosciences An interactive open-access journal of the European Geosciences Union
Journal topic
Volume 10, issue 4
Biogeosciences, 10, 2439-2450, 2013
https://doi.org/10.5194/bg-10-2439-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.
Biogeosciences, 10, 2439-2450, 2013
https://doi.org/10.5194/bg-10-2439-2013
© Author(s) 2013. This work is distributed under
the Creative Commons Attribution 3.0 License.

Research article 12 Apr 2013

Research article | 12 Apr 2013

Microbial colonisation of chasmoendolithic habitats in the hyper-arid zone of the Atacama Desert

J. DiRuggiero1, J. Wierzchos2, C. K. Robinson1, T. Souterre1, J. Ravel3, O. Artieda4, V. Souza-Egipsy5, and C. Ascaso2 J. DiRuggiero et al.
  • 1Biology Department, The Johns Hopkins University, Baltimore, MD, USA
  • 2Museo Nacional de Ciencias Naturales, MNCN – CSIC, 28006 Madrid, Spain
  • 3Institute for Genome Sciences, University of Maryland School of Medicine, Baltimore, MD, USA
  • 4Universidad de Extremadura, 10600 Plasencia, Spain
  • 5Instituto de Ciencias Agrarias, ICA – CSIC, 28006 Madrid, Spain

Abstract. Efforts in searching for microbial life in the driest part of Atacama Desert, Chile, revealed a small number of lithic habitats that can be considered as environmental refuges for life. In this study, we describe for the first time chasmoendolithic colonisation of fissures and cracks of rhyolite-gypsum and calcite rocks collected in the hyper-arid zone of the desert. The use of high-throughput sequencing revealed that the Atacama rock communities comprised a few dominant phylotypes and a number of less abundant taxa representing the majority of the total community diversity. The chasmoendolithic communities were dominated by Chroococcidiopsis species cyanobacteria and supported a number of heterotrophic bacterial lineages. Micro-climate data and geomorphic analysis of the mineral substrates suggested higher water availability in the calcite rocks in the form of enhanced water retention in the complex network of cracks and fissures of these rocks as well as increased occurrence of liquid water in the form of dewfall. These characteristics were associated with a diverse community of phototrophic and heterotrophic bacteria in the calcite chasmoendolithic ecosystem. This study is another example of the diversity of adaptive strategies at the limit for life and illustrates that rock colonisation is controlled by a complex set of factors.

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