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	<journal>
		<journal_title>Biogeosciences</journal_title>
		<journal_url>www.biogeosciences.net</journal_url>
		<issn>1726-4170</issn>
		<eissn>1726-4189</eissn>
		<volume_number>6</volume_number>
		<issue_number>4</issue_number>
		<publication_year>2009</publication_year>
	</journal>
	<doi>10.5194/bg-6-535-2009</doi>
	<article_url>http://www.biogeosciences.net/6/535/2009/</article_url>
	<abstract_html>http://www.biogeosciences.net/6/535/2009/bg-6-535-2009.html</abstract_html>
	<fulltext_pdf>http://www.biogeosciences.net/6/535/2009/bg-6-535-2009.pdf</fulltext_pdf>
	<start_page>535</start_page>
	<end_page>544</end_page>
	<publication_date>2009-04-07</publication_date>
	<article_title content_type="html">Modelling the vertical distribution of bromoform in the upper water column of the tropical Atlantic Ocean</article_title>
	<authors>
		<author numeration="1" affiliations="1,3">
			<name>I. Hense</name>
			<email>inga.hense@uni-hamburg.de</email>
		</author>
		<author numeration="2" affiliations="2">
			<name>B. Quack</name>
		</author>
	</authors>
	<affiliations>
		<affiliation numeration="1" content_type="html">Leibniz Institute for Baltic Sea Research, Rostock, Germany</affiliation>
		<affiliation numeration="2" content_type="html">Leibniz Institute of Marine Sciences, IFM-GEOMAR, Kiel, Germany</affiliation>
		<affiliation numeration="3" content_type="html">now at: University of Hamburg, KlimaCampus, IHF, Grosse  Elbstr. 133, 22767 Hamburg, Germany</affiliation>
	</affiliations>
	<abstract content_type="html">The relative importance of potential source and sink terms for bromoform
(CHBr&lt;sub&gt;3&lt;/sub&gt;) in the tropical Atlantic Ocean is investigated with a coupled
physical-biogeochemical water column model. Bromoform production is either
assumed to be linked to primary production or to phytoplankton losses;
bromoform decay is treated as light dependent (photolysis), and in addition
either vertically uniform, proportional to remineralisation or to
nitrification.  All experiments lead to the observed subsurface maximum of
bromoform, corresponding to the subsurface phytoplankton biomass maximum. In
the surface mixed layer, the concentration is set by entrainment from below,
photolysis in the upper few meters and the outgassing to the atmosphere. The
assumed bromoform production mechanism has only minor effects on the solution,
but the various loss terms lead to significantly different bromoform
concentrations below 200 m depth. The best agreement with observations is
obtained when the bromoform decay is coupled to nitrification (parameterised
by an inverse proportionality to the light field).  Our model results reveal
a pronounced seasonal cycle of bromoform outgassing, with a minimum in summer
and a maximum in early winter, when the deepening surface mixed layer reaches
down into the bromoform production layer.</abstract>
	<references>
		<reference numeration="1" content_type="text"> Abrahamsson, K., Lorén, A., Wulff, A., and Wangberg, S.-A.: Airsea exchange of halocarbons: the inuence of diurnal and regional variations and distribution of pigments, Deep-Sea Res. Pt. II, 29, 2789–2805, 2004. %</reference>
		<reference numeration="2" content_type="text"> %Bahamón, N., Velasquez, Z., and Cruzado, A.: Chlorophyll-a and nitrogen % flux in the tropical North Atlantic Ocean, Deep-Sea Res. Pt. I, 50, % 1189–1203, 2003. </reference>
		<reference numeration="3" content_type="text"> Bange, H W.: Physical oceanography at CTD station PO320, Cruise report R.V. Poseidon, cruise PO320/1, IFM-GEOMAR, Leibniz-Institut für Meereswissenschaften an der Christian-Albrechts-Universität, Kiel, Germany, 2007. </reference>
		<reference numeration="4" content_type="text"> Beckmann, A. and Hense, I.: Beneath the surface: Characteristics of oceanic ecosystems under weak mixing conditions – a theoretical investigation, Prog. Oceanogr., 75, 771–796, 2007. </reference>
		<reference numeration="5" content_type="text"> Burchard, H., Bolding, K., Kühn, W., Meister, A., Neumann, T., and Umlauf, L.: Description of a flexible and extendable physical biogeochemical model system for the water column, J. Mar. Syst., 61, 180–211, 2006. % </reference>
		<reference numeration="6" content_type="text"> Butler, J H., King, D B., Lobert, J M., Montzka, S A., Yvon-Lewis, S A., Hall, B D., Warwick, N J., Mondeel, D J., Aydin, M., and Elkins, J W.: Oceanic distributions and emissions of short-lived halocarbons, Global Biogeochem. Cy., 21, GB1023, doi:10.1029/2006GB002732, 2007. % </reference>
		<reference numeration="7" content_type="text"> Carpenter, L. and Liss, P S.: On temperate sources of bromoform and other reactive organic bromine gases, J. Geophys. Res., C, 105, 20539–20547, 2000. </reference>
		<reference numeration="8" content_type="text"> Conkright, M E., Locarnini, R A., Garcia, H E., O&apos;Brien, T D., Boyer, T P., Stephens, C., and Antonov, J I.: World Ocean Atlas 2001: Objective Analyses, Data Statistics, and Figures, CD-ROM Documentation, Tech. rep., National Oceanographic Data Center, Silver Spring, MD, USA, 2002. </reference>
		<reference numeration="9" content_type="text"> Fairall, C W., Bradley, E F., Rogers, D P., Edson, J B., and Young, G S.: Bulk parameterization of air-sea fluxes for tropical ocean-global atmosphere coupled-ocean atmosphere response experiment, J. Geophys. Res., C, 101, 3747–3764, 1996. </reference>
		<reference numeration="10" content_type="text"> Fetzner, S.: Bacterial dehalogenation, Appl. Microbiol. Biotechnol., 50, 633–657, 1998. </reference>
		<reference numeration="11" content_type="text"> Geen, C E.: Selected marine sources and sinks of bromoform and other low molecular weight organobromines, Ph.D. thesis, Dalhousie, Univ. Halifax, Nova Scotia, Canada, 1992. </reference>
		<reference numeration="12" content_type="text"> Hense, I. and Beckmann, A.: Revisiting subsurface chlorophyll and phytoplankton distributions, Deep-Sea Res. Pt. I, 55, 1193–1199, doi:10.1016/j.dsr.2008.04.009, 2008.  </reference>
		<reference numeration="13" content_type="text"> Hughes, C., Malin, G., Nightingale, P D., and Liss, P.: The effect of light stress on the release of volatile iodocarbons by three species of marine microalgae, Limnol. Oceanogr., 51, 2849–2854, 2006.  </reference>
		<reference numeration="14" content_type="text"> Jakopitsch, C.: Catalase-peroxidase from \textitSynechocystis is capable of chlorination and bromination reactions, Biochemical and biophysical research communications, 287–682, 2001.  % </reference>
		<reference numeration="15" content_type="text"> Karlsson, A., Auer, N., Schulz-Bull, D., and Abrahamsson, K.: Cyanobacterial blooms in the Baltic- A~source of halocarbons, Mar. Chem., 110, 129–139, 2008.  %</reference>
		<reference numeration="16" content_type="text"> %Lomas, M W. and Lipschultz, F.: Forming the primary nitrite maximum: % nitrifiers or phytoplankton?, Limnol. Oceanogr., 51, 2453–2467, 2006. </reference>
		<reference numeration="17" content_type="text"> Manley, S L.: Phytogenesis of halomethanes: A~product of selection or a metabolic accident?, Biogeochemistry, 60, 163–180, 2002. </reference>
		<reference numeration="18" content_type="text"> Martínez-Marrero, A., Rodríguez-Santana, A., Hernández-Guerra, A., Fraile-Nuez, E., López-Laatzen, F., Vélez-Belchí, P., and Parrilla, G.: Distribution of water masses and diapycnal mixing in the Cape Verde Frontal Zone, Geophys. Res. Lett., 35, L07609, doi:10.1029/2008GL033229, 2008. % </reference>
		<reference numeration="19" content_type="text"> Moore, R M. and Tokarczyk, R.: Volatile biogenic halocarbons in the northwest Atlantic, Global Biogeochem. Cy., 7, 195–210, 1993. % </reference>
		<reference numeration="20" content_type="text"> Moore, R M., Geen, C E., and Tait, V K.: Determination of Henrys law constants for a suite of naturally occuring halogenated methanes in seawater, Chemosphere, 30, 1183–1191, 1995.  </reference>
		<reference numeration="21" content_type="text"> Moore, R M., Webb, M., Tokarczyk, R., and Wever, R.: Bromoperoxidase and iodoperoxidase enzymes and production of halogenated methanes in marine diatom cultures, J. Geophys. Res., C, 101, 20899–20908, 1996. % </reference>
		<reference numeration="22" content_type="text"> Nightingale, P D., Malin, G., Law, C S., Watson, A J., Liss, P., Liddicoat, M I., Boutin, J., and Upstill-Goddard, R C.: In situ evaluation of air-sea gas exchange parameterizations using novel conservative and volatile tracers, Global Biogeochem. Cy., 14, 373–387, 2000. % </reference>
		<reference numeration="23" content_type="text"> Olson, R.: Differential photoinhibition of marine nitrifying bacteria: A~possible mechanism for the formation of the primary nitrite maximum, J. Mar. Res., 39, 227–238, 1981. </reference>
		<reference numeration="24" content_type="text"> Oschlies, A. and Schartau, M.: Basin-scale performance of a locally optimized marine ecosystem model, J. Mar. Res., 63, 335–358, 2005. % </reference>
		<reference numeration="25" content_type="text"> Quack, B. and Wallace, D. W R.: Air-sea flux of bromoform: Controls, rates, and implications, Global Biogeochem. Cy., 17, 1023, doi:10.1029/2002GB001890, 2003. % </reference>
		<reference numeration="26" content_type="text"> Quack, B., Atlas, E., Petrick, G., Stroud, V., Schauffler, S., and Wallace, D. W R.: Oceanic bromoform sources for the tropical atmosphere, Geophys. Res. Lett., 31, L23S05, doi:10.1029/2004GL020597, 2004. </reference>
		<reference numeration="27" content_type="text"> Quack, B., Petrick, G., and Wallace, D. W R.: Bromoform and dibromomethane above the Mauritanian upwelling: Atmospheric distributions and oceanic emissions, J. Geophys. Res., D, 112, doi:10.1029/2006JD007614, 2007a. </reference>
		<reference numeration="28" content_type="text"> Quack, B., Peeken, I., Petrick, G., and Nachtigall, K.: Oceanic distribution and sources of bromoform and dibromomethane in the Mauritanian upwelling, J. Geophys. Res., C, 112, C10006, doi:10.1029/2006JC003803, 2007b. </reference>
		<reference numeration="29" content_type="text"> Read, K A., Mahajan, A S., Carpenter, L J., Evans, M J., Faria, B. V E., Heard, D E., Hopkins, J R., Lee, J D., Moller, S J., Lewis, A C., Mendes, L., McQuaid, J B., Oetjen, H., Saiz-Lopez, A., Pilling, M J., and Plane, J. M C.: Extensive halogen-mediated ozone destruction over the tropical Atlantic Ocean, Nature, 453, 1232–1235, 2008. </reference>
		<reference numeration="30" content_type="text"> Schall, C., Heumann, K G., Mora, S D., and Lee, P A.: Biogenic brominated and iodinated organic compounds in ponds on the McMurdo Ice Shelf, Antarctica, Antarct. Sci., 8, 45–48, 1996. </reference>
		<reference numeration="31" content_type="text"> Schartau, M. and Oschlies, A.: Simultaneous data-based optimization of a 1D-ecosystem model at three locations in the North Atlantic Ocean: Part I: Method and parameter estimates, J. Mar. Res., 61, 765–793, 2003. </reference>
		<reference numeration="32" content_type="text"> Sturges, W T., Oram, D E., Carpenter, L J., Penkett, S A., and Engel, A.: Bromoform as a source of stratospheric bromine, Geophys. Res. Lett., 27, 2081–2084, 2000. </reference>
		<reference numeration="33" content_type="text"> Umlauf, L., Bolding, K., and Burchard, H.: GOTM Scientific Documentation. Version 3.2, in: Marine Science Reports, Baltic Sea Research Institute, Warnemünde, Germany, 63, p 231, 2005. </reference>
		<reference numeration="34" content_type="text"> Uppala, S., Kallberg, P., Simmons, A., Andrae, U., da Costa Bechtold, V., Fiorino, M., Gibson, J., Haseler, J., Hernandez, A., Kelly, G., Li, X., Onogi, K., Saarinen, S., Sokka, N., Allan, R., Andersson, E., Arpe, K., Balmaseda, M., Beljaars, A., van~de Berg, L., Bidlot, J., Bormann, N., Caires, S., Chevallier, F., Dethof, A., Dragosavac, M., Fisher, M., Fuentes, M., Hagemann, S., Holm, E., Hoskins, B., Isaksen, L., Janssen, P., Jenne, R., McNally, A., Mahfouf, J.-F., Morcrette, J.-J., Rayner, N., Saunders, R., Simon, P., Sterl, A., Trenberth, K., Untch, A., Vasiljevic, D., Viterbo, P., and Woollen, J.: The ERA-40 re-analysis, Q. J. Roy. Meteor. Soc., 131, 2961–3012, 2005.  </reference>
		<reference numeration="35" content_type="text"> Vogel, T M., Criddle, C S., and McCarthy, P L.: Transformation of halogenated aliphatic compounds, Env. Sci. Technol., 21, 722–736, 1987. </reference>
		<reference numeration="36" content_type="text"> Wahman, D G., Katz, L E., and Speitel, J. G E.: Cometabolism of Trihalomethanes by \textitNitrosomonas europaea, Appl. Environ. Microb., 71, 7980–7986, 2005. </reference>
		<reference numeration="37" content_type="text"> Wallace, D. W R. and Bange, H W.: Introduction to special section: Results of the Meteor 55: Tropical SOLAS Expedition, Geophys. Res. Lett., 31, L23S01, doi:10.1029/2004GL021014, 2004.  </reference>
		<reference numeration="38" content_type="text"> Weber, L., Völker, C., Oschlies, A., and Burchard, H.: Iron profiles and speciation of the upper water column at the Bermuda Atlantic Time-series Study site: a model based sensitivity study, Biogeosciences, 4, 689–706, 2007. </reference>
	</references>
</article>

