<?xml version="1.0" encoding="utf-8" standalone="no"?>
<!DOCTYPE article SYSTEM "http://www.biogeosciences.net/inc/bg/copernicus.dtd">
<article language="en">
	<journal>
		<journal_title>Biogeosciences</journal_title>
		<journal_url>www.biogeosciences.net</journal_url>
		<issn>1726-4170</issn>
		<eissn>1726-4189</eissn>
		<volume_number>5</volume_number>
		<issue_number>3</issue_number>
		<publication_year>2008</publication_year>
	</journal>
	<doi>10.5194/bg-5-797-2008</doi>
	<article_url>http://www.biogeosciences.net/5/797/2008/</article_url>
	<abstract_html>http://www.biogeosciences.net/5/797/2008/bg-5-797-2008.html</abstract_html>
	<fulltext_pdf>http://www.biogeosciences.net/5/797/2008/bg-5-797-2008.pdf</fulltext_pdf>
	<start_page>797</start_page>
	<end_page>816</end_page>
	<publication_date>2008-05-15</publication_date>
	<article_title content_type="html">Reconstruction of the biogeochemistry and ecology of photoautotrophs based on the nitrogen and carbon isotopic compositions of vanadyl porphyrins from Miocene siliceous sediments</article_title>
	<authors>
		<author numeration="1" affiliations="1,2">
			<name>Y. Kashiyama</name>
			<email>chiro@jamstec.go.jp</email>
		</author>
		<author numeration="2" affiliations="2">
			<name>N. O. Ogawa</name>
		</author>
		<author numeration="3" affiliations="3">
			<name>M. Shiro</name>
		</author>
		<author numeration="4" affiliations="1">
			<name>R. Tada</name>
		</author>
		<author numeration="5" affiliations="2">
			<name>H. Kitazato</name>
		</author>
		<author numeration="6" affiliations="2">
			<name>N. Ohkouchi</name>
		</author>
	</authors>
	<affiliations>
		<affiliation numeration="1" content_type="html">Department of Earth and Planetary Science, University of Tokyo, Tokyo, Japan</affiliation>
		<affiliation numeration="2" content_type="html">Institute for Research on Earth Evolution, Japan Agency for Marine-Earth Science and Technology, Yokosuka, Japan</affiliation>
		<affiliation numeration="3" content_type="html">X-ray Research Laboratory, Rigaku Co., Akishima, Japan</affiliation>
	</affiliations>
	<abstract content_type="html">We determined both the nitrogen and carbon isotopic compositions of various
vanadyl alkylporphyrins isolated from siliceous marine sediments of the
Onnagawa Formation (middle Miocene, northeastern Japan) to investigate the
biogeochemistry and ecology of photoautotrophs living in the paleo-ocean.
The distinctive isotopic signals support the interpretations of previous
works that the origin of 17-nor-deoxophylloerythroetioporphyrin (DPEP) is
chlorophylls-&lt;i&gt;c&lt;/i&gt;&lt;sub&gt;1-3&lt;/sub&gt;, whereas 8-nor-DPEP may have originated from
chlorophylls-&lt;i&gt;a&lt;/i&gt;&lt;sub&gt;2&lt;/sub&gt; or &lt;i&gt;b&lt;/i&gt;&lt;sub&gt;2&lt;/sub&gt; or bacteriochlorophyll-&lt;i&gt;a&lt;/i&gt;. Although DPEP and
cycloheptanoDPEP are presumably derived from common precursory pigments,
their isotopic compositions differed in the present study, suggesting that
the latter represents a specific population within the photoautotrophic
community. The average &amp;delta;&lt;sup&gt;15&lt;/sup&gt;N value for the entire
photoautotrophic community is estimated to be &amp;ndash;2 to +1&amp;permil; from the &amp;delta;&lt;sup&gt;15&lt;/sup&gt;N values of DPEP (&amp;ndash;6.9 to &amp;ndash;3.6&amp;permil;; &lt;i&gt;n&lt;/i&gt;=7), considering that the
empirical isotopic relationships that the tetrapyrrole nuclei of
chloropigments are depleted in &lt;sup&gt;15&lt;/sup&gt;N by ~4.8&amp;permil; and enriched in
&lt;sup&gt;13&lt;/sup&gt;C by ~1.8&amp;permil; relative to the whole cells. This
finding suggests that nitrogen utilized in the primary production was
supplied mainly through N&lt;sub&gt;2&lt;/sub&gt;-fixation by diazotrophic cyanobacteria.
Based on the &amp;delta;&lt;sup&gt;13&lt;/sup&gt;C values of DPEP (&amp;ndash;17.9 to &amp;ndash;15.6&amp;permil;; &lt;i&gt;n&lt;/i&gt;=7), we
estimated isotopic fractionation associated with photosynthetic carbon
fixation to be 8&amp;ndash;14&amp;permil;. This range suggests the importance of &amp;beta;-carboxylation and/or active transport of the carbon substrate, indicating
in turn the substantial contribution of diazotrophic cyanobacteria to
primary production. Based on the &amp;delta;&lt;sup&gt;15&lt;/sup&gt;N values of 17-nor-DPEP
(&amp;ndash;7.4 to &amp;ndash;2.4&amp;permil; &lt;i&gt;n&lt;/i&gt;=7), the &amp;delta;&lt;sup&gt;15&lt;/sup&gt;N range of chlorophylls-&lt;i&gt;c&lt;/i&gt;-producing algae was estimated to be &amp;ndash;3 to +3&amp;permil;. This relative depletion in
sup&gt;15&lt;/sup&gt;N suggests that these algae mainly utilized nitrogen regenerated from
diazotrophic cyanobacteria. Given that diatoms are likely to have
constituted the chlorophylls-&lt;i&gt;c&lt;/i&gt;-producing algae within the
biogenic-silica-rich Onnagawa Formation, cyanobacteria-hosting diatoms may
have been important contributors to primary production.</abstract>
	<references>
		<reference numeration="1" content_type="text">Altabet, M. A., Pilskaln, C., Thunell, R., Pride, C., Sigman, D., Chavez, F., and Francois, R.: The nitrogen isotope biogeochemistry of sinking particles from the margin of the eastern North Pacific, Deep Sea Res. Part I, 46, 655&amp;ndash;679, 1999. </reference>
		<reference numeration="2" content_type="text">Aydin, N., Daher, S., and Gulacar, F.: On the sedimentary occurrence of chlorophyllone-$a$, Chemosphere, 52, 937&amp;ndash;942, 2003. </reference>
		<reference numeration="3" content_type="text">Badger, M. R.: The CO&lt;sub&gt;2&lt;/sub&gt;-concentrating mechanism in aquatic phototrophs, in: The Biochemistry of Plants: A Comprehensive Treatise, 10, Photosynthesis, Academic Press, New York, 219&amp;ndash;274, 1987. </reference>
		<reference numeration="4" content_type="text">Baker, E. W. and Louda, J. W.: Porphyrins in the geological record, in: Biological Markers in Sediments, Meth. Geochem. Geophys., 24, Elsevier, Amsterdam, 125&amp;ndash;225, 1986. </reference>
		<reference numeration="5" content_type="text">Baker, E. W. and Palmer, S. E.: Geochemistry of porphyrins, in: The Porphyrins, I, Academic Press, New York, 486&amp;ndash;552, 1978. </reference>
		<reference numeration="6" content_type="text">Barford, C. C., Montoya, J. P., Altabet, M. A., and Mitchell, R.: Steady-state nitrogen isotope effects of N&lt;sub&gt;2&lt;/sub&gt; and N&lt;sub&gt;2&lt;/sub&gt;O production in \textitParacoccus denitrificans, Appl. Environ. Microbiol., 65, 989&amp;ndash;994, 1999. </reference>
		<reference numeration="7" content_type="text">Beale, S. I.: Biosynthesis and structures of porphyrins and heme, in: Anoxygenic Photosynthetic Bacteria, Kluwer Academic Publishers, Netherland, 153&amp;ndash;177, 1995. </reference>
		<reference numeration="8" content_type="text">Bidigare, R. R., Fluegge, A., Freeman, K. H., Hanson, K. L., Hayes, J. M., Hollander, D., Jasper, J. P., King, L. L., Laws, E. A., Milder, J., Millero, F. J., Pancost, R., Popp, B. N., Steinberg, P. A., and Wakeham, S. G.: Consistent fractionation of $^13$C in nature and in the laboratory: Growth-rate effects in some haptophyte algae, Global Biogeochem. Cycles, 11, 279&amp;ndash;292, 1997. </reference>
		<reference numeration="9" content_type="text">Bidigare, R. R., Fluegge, A., Freeman, K. H., Hanson, K. L., Hayes, J. M., Hollander, D., Jasper, J. P., King, L. L., Laws, E. A., Milder, J., Millero, F. J., Pancost, R., Popp, B. N., Steinberg, P. A., and Wakeham, S. G.: Erratum: &quot;Consistent fractionation of $^13$C in nature and in the laboratory: Growth-rate effects in some haptophyte algae&quot;, Global Biogeochem. Cycles, 13, 251&amp;ndash;252, 1999. </reference>
		<reference numeration="10" content_type="text">Bidigare, R. R., Kennicutt II, M. C., and Keeney-Kennicutt, W. L.: Isolation and purification of chlorophylls-$a$ and $b$ for the determination of stable carbon and nitrogen isotope compositions, Anal. Chem., 63, 130&amp;ndash;133, 1991. </reference>
		<reference numeration="11" content_type="text">Boczar, B. A. and Prezelin, B. B.: Chlorophyll-protein complexes from the red-tide dinoflagellate, Gonyaulax polyedra stein, Plant Physiol., 83, 805&amp;ndash;812, 1987. </reference>
		<reference numeration="12" content_type="text">Boreham, C. J., Fookes, C. J. R., Popp, B. N., and Hayes, J. M.: Origins of etioporphyrins in sediments: evidence from stable carbon isotopes, Geochim. Cosmochim. Acta, 53, 2451&amp;ndash;2455, 1989. </reference>
		<reference numeration="13" content_type="text">Boreham, C. J., Fookes, C. J. R., Popp, B. N., and Hayes, J. M.: Origin of petroporphyrins, 2 Evidence from stable isotopes, Energy Fuels, 4, 658&amp;ndash;661, 1990. </reference>
		<reference numeration="14" content_type="text">Brandes, J. A., Devol, A. H., Yoshinari, T., Jayakumar, D. A., and Naqvi, S. W. A.: Isotopic composition of nitrate in the central Arabian Sea and eastern tropical North Pacific: a tracer for mixing and nitrogen cycles, Limnol. Oceanogr., 43, 1680&amp;ndash;1689, 1998. </reference>
		<reference numeration="15" content_type="text">Buck, K. and Bentham, W. N.: A novel symbiosis between a cyanobacterium, \textitSynechococcus sp., an aplastidic protist, \textitSolenicola setigera, and a diatom, \textitLeptocylindrus mediterraneus, in the open ocean, Mar. Biol., 132, 349&amp;ndash;355, 1998. </reference>
		<reference numeration="16" content_type="text">Buffan-Dubau, E., de Wit, R., and Castel, J.: Feeding selectivity of the harpacticoid copepod \textitCanuella perplexa in benthic muddy environments demonstrated by HPLC analyses of chlorin and carotenoid pigments, Mar. Ecol. Prog. Ser., 137, 71&amp;ndash;82, 1996. </reference>
		<reference numeration="17" content_type="text">Calder, J. A. and Parker, P. L.: Geochemical implications of induced changes in C$^13$ fractionation by blue-green algae, Geochim. Cosmochim. Acta, 37, 133&amp;ndash;140, 1973. </reference>
		<reference numeration="18" content_type="text">Callot, H. J. and Ocampo, R.: Geochemistry of porphyrins, in: The Porphyrin Handbook, 1, Synthetic and Organic Chemistry, Chap. 7, Academic Press, New York, 349&amp;ndash;398, 2000. </reference>
		<reference numeration="19" content_type="text">Campbell, L., Nolla, H. A., and Vaulot, D.: The importance of \textitProchlorococcus to community structure in the central North Pacific Ocean, Limnol. Oceanogr., 39, 954&amp;ndash;961, 1994. </reference>
		<reference numeration="20" content_type="text">Capone, D. G., Burns, J. A., Montoya, J. P., Subramaniam, A., Mahaffey, C., Gunderson, T., Michaels, A. F., and Carpenter, E. J.: Nitrogen fixation by \textitTrichodesmium spp.: An important source of new nitrogen to the tropical and subtropical North Atlantic Ocean, Global Biogeochem. Cycles, 19, GB2024, doi:10.1029/2004GB002331, 2005. </reference>
		<reference numeration="21" content_type="text">Capone, D. G., Zehr, J., Paerl, H., Bergman, B., and Carpenter, E. J.: \textitTrichodesmium: A globally significant marine cyanobacterium, Science, 276, 1221&amp;ndash;1229, 1997. </reference>
		<reference numeration="22" content_type="text">Carpenter, E. J.: Marine cyanobacterial symbiosis, Biol. Environ.: Proc. Royal Irish Acad., 102B, 15&amp;ndash;18, 2002. Carpenter, E. J., Harvey, H. R., Fry, B., and Capone, D. G.: Biogeochemical tracers of the marine cyanobacterium \textitTrichodesmium, Deep-Sea Res. I, 44, 27&amp;ndash;38, 1997. </reference>
		<reference numeration="23" content_type="text">Carpenter, E. J. and Janson, S.: Intracellular cyanobacterial symbionts in the marine diatom \textitClimacodium frauenfeldianum Grunow, J. Phycol., 36, 540&amp;ndash;544, 2000. </reference>
		<reference numeration="24" content_type="text">Carpenter, E. J., Montoya, J. P., Burns, J., Mulholland, M. R., Subramaniam, A., and Capone, D. G.: Extensive bloom of a N&lt;sub&gt;2&lt;/sub&gt;-fixing diatom/cyanobacterial association in the tropical Atlantic Ocean, Mar. Ecol. Prog. Ser., 185, 273&amp;ndash;283, 1999. </reference>
		<reference numeration="25" content_type="text">Chamberlain, P. M., McNamara, N. P., Chaplow, J., Stott, A. W., and Black, H. I. J.: Translocation of surface litter carbon into soil by \textitCollembola, Soil Biol. Biochem., 38, 2655&amp;ndash;2664, 2006. </reference>
		<reference numeration="26" content_type="text">Chicarelli, M. I., Hayes, J. M., Popp, B. N., Eckardt, C. B., and Maxwell, J. R.: Carbon and nitrogen isotopic compositions of alkyl porphyrins from the Triassic Serpiano oil shale, Geochim. Cosmochim. Acta, 57, 1307&amp;ndash;1311, 1993. </reference>
		<reference numeration="27" content_type="text">Chikaraishi, Y., Matsumoto, K., Ogawa, N. O., Suga, H., Kitazato, H., and Ohkouchi, N.: Hydrogen, carbon and nitrogen isotopic fractionations during chlorophyll biosynthesis in C3 higher plants, Phytochem., 66, 911&amp;ndash;920, 2005a. </reference>
		<reference numeration="28" content_type="text">Chikaraishi, Y. and Naraoka, H.: $\delta ^13$C and $\delta $D identification of sources of lipid biomarkers in sediments of Lake Haruna (Japan), Geochim. Cosmochim. Acta, 69, 3285&amp;ndash;3297, 2005b. </reference>
		<reference numeration="29" content_type="text">Chillier, X. F. D., Gulacar, F. O., and Buchs, A.: A novel sedimentary lacustrine chlorin: Characterization and geochemical significance, Chemosphere, 27, 2103&amp;ndash;2110, 1993. </reference>
		<reference numeration="30" content_type="text">Chisholm, S. W., Olson, R. J., Zettler, E. R., Goericke, R., Waterbury, J. B., and Welschmeyer, N. A.: A novel free-living prochlorophyte occurs at high cell concentrations in the oceanic euphotic zone, Nature, 334, 340&amp;ndash;343, 1988. </reference>
		<reference numeration="31" content_type="text">Cifuentes, L. A., Fogel, M. L., Pennock, J. R., and Sharp, J. H.: Biogeochemical factors that influence the stable nitrogen isotope ratio of dissolved ammonium in the Delaware Estuary, Geochim. Cosmochim. Acta, 53, 2713&amp;ndash;2721, 1989. </reference>
		<reference numeration="32" content_type="text">Cline, J. D. and Kaplan, I. R.: Isotopic fractionation of dissolved nitrate during denitrification in the eastern tropical North Pacific Ocean, Mar. Chem., 3, 271&amp;ndash;299, 1975. </reference>
		<reference numeration="33" content_type="text">Colman, B.: Photosynthetic carbon assimilation and the suppression of photorespiration in the cyanobacteria, Aquat. Bot., 34, 211&amp;ndash;231, 1989. </reference>
		<reference numeration="34" content_type="text">Davis, C. S. and McGillicuddy, D. J. Jr.: Transatlantic abundance of the N&lt;sub&gt;2&lt;/sub&gt;-fixing colonial cyanobacterium \textitTrichodesmium, Science, 312, 1517&amp;ndash;1520, 2006. </reference>
		<reference numeration="35" content_type="text">Delwiche, C. C. and Steyn, P. L.: Nitrogen isotope fractionation in soils and microbial reactions, Environ. Sci. Technol., 4, 929&amp;ndash;935, 1970. </reference>
		<reference numeration="36" content_type="text">Di Nello, R. K. and Dolphin, D.: Evidence for fast (major) and slow (minor) pathway in the Schumm devinylation reaction of vinylporphyrins, J. Org. Chem., 46, 3498&amp;ndash;3505, 1981. </reference>
		<reference numeration="37" content_type="text">Eckardt, C. B., Keely, B. J., Waring, J. R., Chicarelli, M. I., and Maxwell, J. R. Preservation of chlorophyll-derived pigments in sedimentary organic matter, Phil. Trans., Loyal Soc. Lond. B, 333, 339&amp;ndash;348, 1991. </reference>
		<reference numeration="38" content_type="text">Farquhar, G. D., Ball, M. C., Von Caemmerer, S., Roksandic, Z.: Effect of salinity and humidity on $\delta ^13$C value of halophytes - evidence for diffusional isotope fractionation determined by the ratio of intercellular/atmospheric partial pressure of CO&lt;sub&gt;2&lt;/sub&gt; under different environmental conditions, Oecologia, 52, 121&amp;ndash;124, 1982a. </reference>
		<reference numeration="39" content_type="text">Farquhar, G. D., O&apos;Leary, M. H., and Berry, J. A.: On the relationship between carbon isotope discrimination and the intercellular carbon dioxide concentration in leaves, Australian J. Plant Physiol., 9, 121&amp;ndash;137, 1982b. </reference>
		<reference numeration="40" content_type="text">Filer, C. N.: Isotopic fractionation of organic compounds in chromatography, J. Labelled Comp. Radiopharm., 42, 169&amp;ndash;197, 1999. </reference>
		<reference numeration="41" content_type="text">Fookes, C. J. R.: Structure determination of nickel(II) deoxophylloerythroetioporphyrin and a C$_30$ homologue from an oil shale: Evidence that petroporphyrins are derived from chlorophyll, J. Chem. Soc., Chem. Comm., 1983, 1472&amp;ndash;1473, 1983. </reference>
		<reference numeration="42" content_type="text">Foster, R. A., Subramaniam, A., Mahaffey, C., Carpenter, E. J., Capone, D. G., and Zehr, J. P.: Influence of the Amazon River plume on distributions of free-living and symbiotic cyanobacteria in the western tropical north Atlantic Ocean, Limnol. Oceanogr., 52, 517&amp;ndash;532, 2007. </reference>
		<reference numeration="43" content_type="text">Freeman, K. H. and Hayes, J. M.: Fractionation of carbon isotopes by phytoplankton and estimates of ancient CO&lt;sub&gt;2&lt;/sub&gt; levels, Global Biogeochem. Cycles, 6, 185&amp;ndash;198, 1992. </reference>
		<reference numeration="44" content_type="text">Gibbison, R., Peakman, T. M., and Maxwell, J. R.: Novel porphyrins as molecular fossils for anoxygenic photosynthesis., Tetrahedron Lett., 36, 9057&amp;ndash;9060, 1995. </reference>
		<reference numeration="45" content_type="text">Goericke, R. and Fry, B.: Variations of marine plankton $\delta ^13$C with latitude, temperature, and dissolved CO&lt;sub&gt;2&lt;/sub&gt; in the world ocean, Global Biogeochem. Cycles, 8, 85&amp;ndash;90, 1994. </reference>
		<reference numeration="46" content_type="text">Goericke, R. and Repeta, D.: The pigments of \textitProchlorococcus marinus: the presence of divinyl chlorophyll-$a$ and $b$ in a marine prokaryote, Limnol. Oceanogr., 37, 425&amp;ndash;434, 1992. </reference>
		<reference numeration="47" content_type="text">Goericke, R., Strom, S. L., and Bell, M. A.: Distribution and sources of cyclic pheophorbides in the environment, Limnol. Oceanogr., 45, 200&amp;ndash;211, 2000. </reference>
		<reference numeration="48" content_type="text">Gómez, F., Furuya, K., and Takeda, S.: Distribution of the cyanobacterium \textitRichelia intracellularis as an epiphyte of the diatom \textitChaetoceros compressus in the western Pacific Ocean, J. Plankton Res., 27, 323&amp;ndash;330, 2005. </reference>
		<reference numeration="49" content_type="text">Guy, R. D., Fogel, M. L., Berry, J. A., and Hoering, T. C.: Isotope fractionation during oxygen production and consumption by plants, Prog. Phytosyn. Res. III., 9, 597&amp;ndash;600, 1987. </reference>
		<reference numeration="50" content_type="text">Harris, P. G., Pearce, G. E. S., Peakman, T. M. and Maxwell, J. R.: A widespread and abundant chlorophyll transformation product in aquatic environments, Org. Geochem., 23, 183&amp;ndash;187, 1995. </reference>
		<reference numeration="51" content_type="text">Hare, P. E., Fogel, M. L., Stafford, T. W., Mitchell, A. D., and Hoering, T. C.: The isotopic composition of carbon and nitrogen in individual amino acids isolated from modern and fossil proteins, J. Archaeol. Sci., 18, 211&amp;ndash;292, 1991. </reference>
		<reference numeration="52" content_type="text">Hayes, J. M.: Factors controlling $^13$C contents of sedimentary organic compounds: Principles and evidence, Mar. Geol., 113, 111&amp;ndash;125, 1993. </reference>
		<reference numeration="53" content_type="text">Hayes, J. M., Takigiku, R., Ocampo, R., Callot, H. J., and Albrecht, P.: Isotopic compositions and probable origins of organic molecules in the Eocene Messel shales, Nature, 329, 48&amp;ndash;51, 1987. </reference>
		<reference numeration="54" content_type="text">Hoch, M. P., Fogel, M. L., and Kirchiman, D. L.: Isotope fractionation associated with ammonium uptake by a marine bacterium, Limnol. Oceanogr., 37, 1447&amp;ndash;1459, 1992. </reference>
		<reference numeration="55" content_type="text">Hodell, D. A. and Vayavananda, A.: Early middle Miocene paleoceanography of the western equatorial Pacific (DSDP site 289) and the evolution of \textitGloborotalia (\textitFohsella), Mar. Micropaleontol., 22, 279&amp;ndash;310, 1994. </reference>
		<reference numeration="56" content_type="text">Hoering, T. C. and Ford, H. T.: The isotope effect in the fixation of nitrogen by \textitAzotobacter, J. Am. Chem. Soc., 82, 376&amp;ndash;378, 1960. </reference>
		<reference numeration="57" content_type="text">Hoyt, P.B.: Chlorophyll-type compounds in soil. II. Their decomposition, Plant and Soil, 25, 313&amp;ndash;328, 1966. </reference>
		<reference numeration="58" content_type="text">Iijima, A. and Tada, R.: Evolution of Tertiary sedimentary basins of Japan in reference to opening of the Japan Sea, J. Fac. Sci., Univ. Tokyo, Sec. II, 22, 121&amp;ndash;171, 1990. </reference>
		<reference numeration="59" content_type="text">Jasper, J. P. and Hayes, J. M.: A carbon isotope record of CO&lt;sub&gt;2&lt;/sub&gt; levels during the late Quaternary, Nature, 347, 462&amp;ndash;464, 1990. </reference>
		<reference numeration="60" content_type="text">Jasper, J. P., Hayes, J. M., Mix, A. C., and Prahl, F. G.: Photosynthetic fractionation of $^13$C and concentrations of dissolved CO&lt;sub&gt;2&lt;/sub&gt; in the central equatorial Pacific during the last 255,000 years, Paleoceanogr., 9, 781&amp;ndash;798, 1994. </reference>
		<reference numeration="61" content_type="text">Kaplan, A., Schwartz, R., Lieman-Hurwitz, J., Ronen-Tarazi, M., and Reinhold, L.: Physiological and molecular studies on the responses of cyanobacteria to changes in the ambient inorganic carbon concentration, in: The Molecular Biology of Cyanobacteria, Kluwer Academic Publishers, Netherland, 469&amp;ndash;485, 1993. </reference>
		<reference numeration="62" content_type="text">Karl, D., Letelier, R., Tupas, L., Dore, J., Christian, J., and Hebel, D.: The role of nitrogen fixation in biogeochemical cycling in the subtropical North Pacific Ocean, Nature, 386, 533&amp;ndash;538, 1997. </reference>
		<reference numeration="63" content_type="text">Karuso, P., Bergquist, P. R., Buckleton, J. S., Cambie, R. C., Clark, G. R., and Rickard, C. E. F.: 13&lt;sup&gt;2&lt;/sup&gt;,17&lt;sup&gt;3&lt;/sup&gt;-cyclopheophorbide enol, the first porphyrin isolated from a sponge, Tetrahedron Lett., 27, 2177&amp;ndash;2178, 1986. </reference>
		<reference numeration="64" content_type="text">Kashiyama, Y.: Reconstruction of biogeochemical environment of the past ocean based on compound-specific carbon and nitrogen isotopic compositions of sedimentary porphyrins, Ph.D. thesis, Graduate School of Science, The University of Tokyo, Japan, 2006. </reference>
		<reference numeration="65" content_type="text">Kashiyama, Y., Kitazato, H., and Ohkouchi, N.: An improved method for isolation and purification of sedimentary porphyrins by high-performance liquid chromatography for compound-specific isotopic analysis, J. Chromatogr. A, 1138, 73&amp;ndash;83, 2007a. </reference>
		<reference numeration="66" content_type="text">Kashiyama, Y., Shiro, M., Tada, R., and Ohkouchi, N.: A novel vanadyl alkylporphyrins from geological samples: a possible derivative of divinylchlorophylls or bacteriochlorophyll-$a$? Chem. Lett., 36, 706&amp;ndash;707, 2007b. </reference>
		<reference numeration="67" content_type="text">Kashiyama, Y., Ogawa, N. O., Kuroda, J., Shiro, M., Nomoto, S., Tada, R., Kitazato, H., and Ohkouchi, N.: Diazotrophic cyanobacteria as the major photoautotrophs during mid-Cretaceous oceanic anoxic events: nitrogen and carbon isotopic evidence from sedimentary porphyrin, Org. Geochem., 39, 532&amp;ndash;549, 2008. </reference>
		<reference numeration="68" content_type="text">Keely, B. J., Brereton, R. G., and Maxwell, J. R.: Occurrence and significance of pyrochlorins in a lake sediment, Org. Geochem., 13, 801&amp;ndash;805, 1988. </reference>
		<reference numeration="69" content_type="text">Keely, B. J., Harris, P. G., Popp, B. N., Hayes, J. M., Meischner, D., and Maxwell, J. R.: Porphyrin and chlorin distributions in a Lake Pliocene lacustrine sediment, Geochim. Cosmochim. Acta, 58, 3691&amp;ndash;3701, 1994. </reference>
		<reference numeration="70" content_type="text">Keely, B. J. and Maxwell, J. R.: Structural characterization of the major chlorins in a Recent sediment, Org. Geochem., 17, 663&amp;ndash;669, 1991. </reference>
		<reference numeration="71" content_type="text">Keely, B. J., Prowse, W. G., and Maxwell, J. R.: The Treibs&apos; hypothesis: An evaluation based on structural studies, Energy Fuels, 4, 628&amp;ndash;634, 1990. </reference>
		<reference numeration="72" content_type="text">Kemp, A. E. S., Pearce, R. B., Koizumi, I., Pike, J., and Rance, S. J.: The role of mat-forming diatoms in formation of the Mediterranean sapropels, Nature, 398, 57&amp;ndash;61, 1999. </reference>
		<reference numeration="73" content_type="text">Kennett, J. P.: Miocene and early Pliocene oxygen and carbon isotope stratigraphy of the southwest Pacific, Deep Sea Drilling Project, leg 90, Initial Rep. Deep Sea Drill. Proj., 90, 1383&amp;ndash;1411, 1986. </reference>
		<reference numeration="74" content_type="text">Koizumi, I. and Matoba, Y.: On the top of the Nishikurosawa Stage, Mem. Geol. Soc. Japan, 32, 187&amp;ndash;195, 1989 (in Japanese). </reference>
		<reference numeration="75" content_type="text">Kolber, Z. S., Plumley, F. G., Lang, A. S., Beatty, J. T., Blankenship, R. E., VanDover, C. L., Vetriani, C., Koblizek, M., Rathgeber, C., and Falkowski, P. G.: Contribution of aerobic photoheterotrophic bacteria to the carbon cycle in the ocean, Science, 292, 2492&amp;ndash;2495, 2001. </reference>
		<reference numeration="76" content_type="text">Koshikawa, T.: The development of high-resolution, rapid, quantitative analytical method of sedimentary rocks by X-ray analytical microscope and application to interpretation of sedimentation mechanism of Miocene siliceous rocks. Ms.Sci. thesis, Graduate School of Science, The University of Tokyo, Japan, 2002 (in Japanese). </reference>
		<reference numeration="77" content_type="text">Kozono, M., Nomoto, S., and Shimoyama, A.: The first experimental simulation of thermal transformation of chlorophylls into benzoporphyrins in sediments, Chem. Lett., 2002, 470&amp;ndash;471, 2002. </reference>
		<reference numeration="78" content_type="text">Kräutler, B., Jaun, B., Bortlik, K., Schellenberg, M., and Matile, P.: On the enigma of chlorophyll degradation: the constitution of a secoporphinoid catabolite, Angew. Chem. Int. Ed. Engl., 30, 1315&amp;ndash;1318, 1991. </reference>
		<reference numeration="79" content_type="text">Kühl, M., Chen, M., Ralph, P. J., Schreiber, U., and Larkum, A. W. D.: A niche for cyanobacteria containing chlorophyll-$d$, Nature, 433, 8209, 2005. </reference>
		<reference numeration="80" content_type="text">Liu, K. -K. and Kaplan, I. R.: The eastern tropical Pacific as a source of $^15$N-enriched nitrate in seawater off southern California, Limnol. Oceanogr., 34, 820&amp;ndash;830, 1989. </reference>
		<reference numeration="81" content_type="text">Macko, S. A., Fogel, M. L., Hare, P. E., and Hoering, T. C.: Isotopic fractionation of nitrogen and carbon in the synthesis of amino acids by microorganism, Chem. Geol., 65, 79&amp;ndash;92, 1987. </reference>
		<reference numeration="82" content_type="text">Martin, J. H., Coale, K. H., Johnson, K. S., Fitzwater, S. E., Gordon, R. M., Tanner, S. J., Hunter, C. N., Elrod, V. A., Nowicki, J. L., Coley, T. L., Barber, R. T., Lindley, S., Watson, A. J., Van Scoy, K., Law, C. S., Liddicoat, M. I., Ling, R., Stanton, T., Stockel, J., Collins, C., Anderson, A., Bidigare, R., Ondrusek, M., Latasa, M., Millero, F. J., Lee, K., Yao, W., Zhang, J. Z., Friederich, G., Sakamoto, C., Chavez, F., Buck, K., Kolber, Z., Greene, R., Falkowski, P., Chisholm, S. W., Hoge, F., Swift, R., Yungel, J., Turner, S., Nightingale, P., Hatton, A., Liss, P., and Tindale, N. W.: Testing the iron hypothesis in ecosystems of the equatorial Pacific Ocean, Nature, 371, 123&amp;ndash;129, 1994. </reference>
		<reference numeration="83" content_type="text">Martinez, L., Silver, M. W., King, J. M., and Alldredge, A. L.: Nitrogen fixation by floating diatom mats: A source of new nitrogen to oligotrophic ocean waters, Science, 221, 152&amp;ndash;154, 1983. </reference>
		<reference numeration="84" content_type="text">Matile, P., Hörtensteiner, S., Thomas, H., and Kräutler, B.: Chlorophyll breakdown in senescent leaves, Plant Physiol., 112, 1403&amp;ndash;1409, 1996. </reference>
		<reference numeration="85" content_type="text">Meador, T. B. and Aluwihare, L. I.: Isotopic heterogeneity and cycling of organic nitrogen in the oligotrophic ocean, Limnol. Oceanogr., 52, 934&amp;ndash;947, 2007. </reference>
		<reference numeration="86" content_type="text">Miller, S. R., Augustine, S., Le Olson, T., Blankenship, R. E., Selker, J., and Wood, A. M.: Discovery of a free-living chlorophyll-$d$-producing cyanobacterium with a hybrid proteobacterial/cyanobacterial small subunit rRNA gene, Proc. Natl. Acad. Sci. U. S. A., 102, 850&amp;ndash;855, 2005. </reference>
		<reference numeration="87" content_type="text">Minagawa, M. and Wada, E.: Nitrogen isotope ratios of red tide organisms in the East China Sea: a characterization of biological nitrogen fixation, Mar. Chem., 19, 245&amp;ndash;259, 1986. </reference>
		<reference numeration="88" content_type="text">Mino, Y., Saino, T., Suzuki, K., and Marañón, E.: Isotopic composition of suspended particulate nitrogen ($\delta ^15$N$_sus)$ in surface waters of the Atlantic Ocean from 50$^o$N to 50$^o$S, Global Biogeochem. Cycles, 16, 1059, doi:10.1029/2001GB001635, 2003. </reference>
		<reference numeration="89" content_type="text">Miyashita, H., Ikemoto, H., Kurano, N., Adachi, K., Chihara, M., and Miyachi, S.: Chlorophyll-$d$ as a major pigment, Nature, 383, 402&amp;ndash;402, 1996. </reference>
		<reference numeration="90" content_type="text">Miyashita, H., Ikemoto, H., Kurano, N., Miyachi, S., and Chihara, M.: \textitAcaryochloris marina gen. et sp. Nov. (cyanobacteria), an oxygenic photosynthetic prokaryote containing Chl $d$ as a major pigment, J. Phycol., 39, 1247&amp;ndash;1253, 2003. </reference>
		<reference numeration="91" content_type="text">Miyake, Y. and Wada, E., The abundance ratio of $^15$N/$^14$N in marine environments, Rec. Oceanogr. Works Jpn., 9, 37&amp;ndash;53, 1967. </reference>
		<reference numeration="92" content_type="text">Montoya, J. P., Carpenter, E. J., and Capone, D. G.: Nitrogen fixation and nitrogen isotope abundances in zooplankton of the oligotrophic North Atlantic, Limnol. Oceanogr., 47, 1617&amp;ndash;1628, 2002. </reference>
		<reference numeration="93" content_type="text">Montoya, J. P., Holl, C. M., Zehr, J. P., Hansen, A., Villareal, T. A., and Capone, D. G.: High rates of N&lt;sub&gt;2&lt;/sub&gt; fixation by unicellular diazotrophs in the oligotrophic Pacific Ocean, Nature, 430, 1027&amp;ndash;1031, 2004. </reference>
		<reference numeration="94" content_type="text">Mook, W. G., Bommerson, J. C., and Staberman, W. H.: Carbon isotope fractionation between dissolved bicarbonate and gaseous carbon dioxide, Earth. Planet. Sci. Lett., 22, 169&amp;ndash;176, 1974. </reference>
		<reference numeration="95" content_type="text">Morel, F. M. M.: Zinc and carbon co-limitation of marine-phytoplankton, Nature, 369, 740&amp;ndash;742, 1994. </reference>
		<reference numeration="96" content_type="text">Nomaki, H., Heinz, P, Nakatsuka, T., Shimanaga, M., Ohkouchi, N., Ogawa, N. O., Kogure, K., Ikemoto, E., and Kitazato, H.: Different ingestion patterns of $^13$C-labeled bacteria and algae by deep-sea benthic foraminifera, Mar. Ecol. Prog. Ser., 310, 95&amp;ndash;108, 2006. </reference>
		<reference numeration="97" content_type="text">Oberhuber, M., Berghold, J., Breuker, K., Hörtensteiner, S., and Kräutler, B.: Breakdown of chlorophyll: a nonenzymatic reaction accounts for the formation of the colorless &quot;nonfluorescent&quot; chlorophyll catabolites, Proc. Nat. Acad. Sci., 100, 6910&amp;ndash;6915, 2003. </reference>
		<reference numeration="98" content_type="text">Ocampo, R., Bauder, C., Callot, H. J., and Albrecht, P.: Porphyrins from Messel oil shale (Eocene, Germany): structure elucidation, geochemical and biological significance, and distribution as a function of depth, Geochim. Cosmochim. Acta, 56, 745&amp;ndash;761, 1992. </reference>
		<reference numeration="99" content_type="text">Ocampo, R., Callot, H. J., and Albrecht, P.: Occurrence of bacteriopetroporphyrins in oil shale, J. Chem. Soc., Chem. Commun., 1985, 200&amp;ndash;201, 1985. </reference>
		<reference numeration="100" content_type="text">Ocampo, R., Callot, H. J., Albrecht, P., Popp, B. N., Horowitz, M. R., and Hayes, J. M.: Different isotope compositions of C$_32$ DPEP and C$_32$ etioporphyrin III in oil shale, Naturwiss., 76, 419&amp;ndash;421, 1989. </reference>
		<reference numeration="101" content_type="text">Ocampo, R., Sachs, J. P., and Repeta, D. J.: Isolation and structure determination of a very unstable enol chlorin from sediments, 18th International Meeting on Organic Geochemistry, Maastricht, The Netherlands, 22&amp;ndash;26 September, 1997. </reference>
		<reference numeration="102" content_type="text">Ocampo, R., Sachs, J. P., and Repeta, D. J.: Isolation and structure determination of the very unstable 13&lt;sup&gt;2&lt;/sup&gt;,17&lt;sup&gt;3&lt;/sup&gt;-cyclopheophorbide $a$ enol from recent sediments, Geochim. Cosmochim. Acta, 63, 3743&amp;ndash;3749, 1999. </reference>
		<reference numeration="103" content_type="text">Ogawa, T. and Kaplan, A.: Inorganic carbon acquisition systems in cyanobacteria, Photosynth. Res., 77, 105&amp;ndash;115, 2003. </reference>
		<reference numeration="104" content_type="text">Ohkouchi, N., Kashiyama, Y., Kuroda, J., Ogawa, N. O., Kitazato, H., An importance of cyanobacteria as a primary producer during Cretaceous Oceanic Anoxic Event 2, Biogeosciences, 3, 575&amp;ndash;605, 2006. </reference>
		<reference numeration="105" content_type="text">Ohkouchi, N., Nakajima, Y., Ogawa, N. O., Chikaraishi, Y., Suga, H., Sakai, S., and Kitazato, H.: Carbon isotopic composition of the tetrapyrrole nucleus in chloropigments from a saline meromictic lake: A mechanistic view for interpreting the isotopic signature of alkyl porphyrins in geological samples, Org. Geochem., 39, 510&amp;ndash;520, 2008. </reference>
		<reference numeration="106" content_type="text">Ohkouchi, N., Nakajima, Y., Okada, H., Ogawa, N. O., Suga, H., Oguri, K., and Kitazato, H.: Biogeochemical processes in a meromictic lake Kaiike: Implications from carbon and nitrogen isotopic compositions of photosynthetic pigments, Environ. Microbiol., 7, 1009&amp;ndash;1016, 2005. </reference>
		<reference numeration="107" content_type="text">Pagani, M., Freeman, K. H., and Arthur, M. A.: Late Miocene atmospheric CO&lt;sub&gt;2&lt;/sub&gt; concentrations and the expansion of C&lt;sub&gt;4&lt;/sub&gt; grasses, Science, 285, 876&amp;ndash;879, 1999. </reference>
		<reference numeration="108" content_type="text">Pancost, R. D., Freeman, K. H., Wakeham, S. G., and Robertson, C. Y.: Controls on carbon isotope fractionation by diatoms in the Peru upwelling region, Geochim. Cosmochim. Acta, 61, 4983&amp;ndash;4991, 1997. </reference>
		<reference numeration="109" content_type="text">Partensky, F., Hess, W. R., and Vaulot, D.: \textitProchlorococcus, a marine photosynthetic prokaryote of global significance, Microbiol. Mol. Biol. Rev., 63, 106&amp;ndash;127, 1999. </reference>
		<reference numeration="110" content_type="text">Pennock, J. R., Velinski, D. J., Ludham, D. J., Sharp, J. H., and Fogel, M. L.: Isotope fractionation of ammonium and nitrate during the uptake by \textitSkeletonema costatum: Implications for the $\delta ^15$N dynamics under bloom conditions, Limnol. Oceanogr., 41, 45l&amp;ndash;459, 1996. </reference>
		<reference numeration="111" content_type="text">Prowse, W. G., Chicarelli, M. I., Keely, B. J., Kaur, S., and Maxwell, J. R.: Characterization of fossil porphyrins of the &quot;di-DPEP&quot; type, Geochim. Cosmochim. Acta, 51, 2875&amp;ndash;2877, 1987. </reference>
		<reference numeration="112" content_type="text">Prowse, W. G., Keely, B. J., and Maxwell, J. R.: A novel sedimentary metallochlorin, Org. Geochem., 16, 1059&amp;ndash;1065, 1990. </reference>
		<reference numeration="113" content_type="text">Popp, B. N., Laws, E. A., Bidigare, R. R., Dore, J. E., Hanson, K. L., and Wakeham, S. G.: Effect of phytoplankton cell geometry on carbon isotopic fractionation, Geochim. Cosmochim. Acta, 62, 69&amp;ndash;77, 1998. </reference>
		<reference numeration="114" content_type="text">Popp, B. N., Takigiku, R., Hayes, J. M., Louda, J. W., and Baker, E. W.: The post-Paleozoic chronology and mechanism of $^13$C depletion in primary marine organic matter, Am. J. Sci., 289, 436&amp;ndash;454, 1989. </reference>
		<reference numeration="115" content_type="text">Popp, B. N., Trull, T., Kenig, F., Wakeham, S. G., Rust, T. M., Tilbrook, B., Griffiths, F. B., Wright, S. W., Marchant, H. J., Bidigare, R. R., and Laws, E. A.: Controls on the carbon isotopic composition of Southern Ocean phytoplankton, Global Biogeochem. Cycles, 13, 827&amp;ndash;844, 1999. </reference>
		<reference numeration="116" content_type="text">Postgate, J.: The origins of the unit of nitrogen fixation at the University of Sussex, Notes Rec. Royal Soc. Lond., 52, 355&amp;ndash;362, 1998. </reference>
		<reference numeration="117" content_type="text">Rau, G. H., Sweeney, R. E., and Kaplan, I. R.: Plankton $^13$C/$^12$C ratio changes with latitude: Differences between northern and southern oceans, Deep-Sea Res., 29, 1035&amp;ndash;1039, 1982. </reference>
		<reference numeration="118" content_type="text">Raven, J. A.: Inorganic carbon acquisition by marine autotrophs, in: Advances in Botanical Research, 27, Academic Press, 85&amp;ndash;209, 1997. </reference>
		<reference numeration="119" content_type="text">Sachs, J. P. and Repeta, D.J.: Oligotrophy and nitrogen fixation during eastern Mediterranean sapropel events, Science, 286, 2485&amp;ndash;2488, 1999. </reference>
		<reference numeration="120" content_type="text">Sachs, J. P., Repeta, D. J., and Goericke, R.: Nitrogen and carbon isotopic ratios of chlorophyll from marine phytoplankton, Geochim. Cosmochim. Acta, 63, 1431&amp;ndash;1441, 1999. </reference>
		<reference numeration="121" content_type="text">Sakata, K., Yamamoto, K., Ishikawa, H., Yagi, A., Etoh, H., and Ina, K.: Chlorophyllone-$a$, a new phaeophorbide $a$ related compound isolated from \textitRuditapes phillippinarum as an antioxidative compound, Tetrahedron Lett., 31, 1165&amp;ndash;1168, 1990. </reference>
		<reference numeration="122" content_type="text">Sanger, J. E.: Fossil Pigments in paleoecology and paleolimnology, Palaeogeogr. Palaeoclimatol. Palaeoecol., 62, 343&amp;ndash;359, 1988. </reference>
		<reference numeration="123" content_type="text">Sampei, Y., Inaba, T., and Suzuki, N.: Abnormally abundant alkenone-derived C$_37$ and C$_38$ n-alkanes in Miocene Onnagawa siliceous mudstones, northeast Japan, Org. Geochem., 34, 1247&amp;ndash;1258, 2003. </reference>
		<reference numeration="124" content_type="text">Scharek, R., Tupas, L. M., and Karl, D. M.: Diatom fluxes to the deep sea in the oligotrophic North Pacific gyre at Station ALOHA, Mar. Ecol. Prog. Ser., 182, 55&amp;ndash;67, 1999. </reference>
		<reference numeration="125" content_type="text">Serebrennikova, O. V., Mozzhelina, T. K., and Shul&apos;ga, A. M.: Structure and genesis of C$_30$-homologues of petroleum vanadylporphyrins, Geokhimiya, 1987, 1494&amp;ndash;1496, 1987 (in Russian). </reference>
		<reference numeration="126" content_type="text">Shaked, Y., Xu, Y., Leblanc, K., and Morel, F. M. M.: Zinc availability and alkaline phosphatase activity in \textitEmiliania huxleyi: Implications for Zn-P co-limitation in the ocean, Limnol. Oceanogr., 51, 299&amp;ndash;309, 2006. </reference>
		<reference numeration="127" content_type="text">Sharkey, T. and Berry, J. A.: Carbon isotope fractionation of algae as influenced by an inducible CO&lt;sub&gt;2&lt;/sub&gt; concentrating mechanism, in: Inorganic Carbon Uptake by Aquatic Photosynthetic Organisms, Am. Soc. Plant Physiol., Rockville, Maryland, 389&amp;ndash;402, 1985. </reference>
		<reference numeration="128" content_type="text">Shul&apos;ga, A. M., Serebrennikova, O. V., and Mozzhelina, T. K.: Research on PMR-spectra of C$_30$, C$_31$, and C$_32$ homologues of petroleum porphyrins, Neftekhimiya, 26, 309&amp;ndash;314, 1986 (in Russian). </reference>
		<reference numeration="129" content_type="text">Sigman, D. M., Altabet, M. A., McCorkle, D. C., Francois, R., and Fischer, G.: The $\delta ^15$N of nitrate in the Southern Ocean: Nitrogen cycling and circulation in the ocean interior, J. Geophys. Res., 105, 19599&amp;ndash;19614, 2000. </reference>
		<reference numeration="130" content_type="text">Sigman, D. M., Granger, J., DiFiore, P. J., Lehmann, M. M., Ho, R., Cane, G., and van Geen, A.: Coupled nitrogen and oxygen isotope measurements of nitrate along the eastern North Pacific margin, Global Biogeochem. Cycles, 19, GB4022, doi:10.1029/2005GB002458, 2005. </reference>
		<reference numeration="131" content_type="text">Sigman, D. M., Robinson, R., Knapp, A. N., van Geen, A., McCorkle, D. C., Brandes, J. A., and Thunell, R. C.: Distinguishing between water column and sedimentary denitrification in the Santa Barbara Basin using the stable isotopes of nitrate, Geochem. Geophys. Geosyst., 4, 1040, doi:10.1029/2002GC000384, 2003. </reference>
		<reference numeration="132" content_type="text">Sundararaman, P. and Boreham, C. J.: Vanadyl 3-nor C$_30$DPEP: indicator of depositional environment of a lacustrine sediment, Geochim. Cosmochim. Acta, 55, 389&amp;ndash;395, 1991. </reference>
		<reference numeration="133" content_type="text">Sundararaman, P. and Boreham, C. J.: Comparison of nickel and vanadyl porphyrin distributions of sediments, Geochim. Cosmochim. Acta, 57, 1367&amp;ndash;1377, 1993. </reference>
		<reference numeration="134" content_type="text">Sundararaman, P., Hwang, R. J., Ocampo, R., Boreham, C. J., Callot, H. J., and Albrecht, P.: Temporal changes in distribution of C$_33$cycloheptenoDPEP and 17-nor C$_30$DPEP in rocks, Org. Geochem., 21, 1051&amp;ndash;1058, 1994. </reference>
		<reference numeration="135" content_type="text">Suzuki, N., Sampei, Y., and Koga, O.: Norcholestane in Miocene Onnagawa siliceous sediments, Japan, Geochim. Cosmochim. Acta, 57, 4539&amp;ndash;4545, 1993. </reference>
		<reference numeration="136" content_type="text">Tabita, F. R.: Biochemistry and molecular regulation of carbon dioxide metabolism in cyanobacteria, in: The Molecular Biology of Cyanobacteria, Kluwer Academic Publishers, Netherland, 437&amp;ndash;467, 1993. </reference>
		<reference numeration="137" content_type="text">Tada, R.: Origin of rhythmical bedding in middle Miocene siliceous rocks of the Onnagawa Formation, northeastern Japan, J. Sed. Petrol., 61, 1123&amp;ndash;1145, 1991. </reference>
		<reference numeration="138" content_type="text">Taylor, F. J. R.: Symbioses in marine microplankton, Ann. Inst. Oceanogr. Paris, 58, 61&amp;ndash;90, 1982. </reference>
		<reference numeration="139" content_type="text">Thingstad, T. F. and Rassoulzadegan, F.: Nutrient limitations, microbial food webs and `biological pumps&apos;: suggested interactions in a P-limited Mediterranean, Mar. Ecol.-Prog. Ser., 117, 299&amp;ndash;306, 1995. </reference>
		<reference numeration="140" content_type="text">Thode, H. G., Shima, M., Rees, C. E., and Krishnamurthy. K. V.: Carbon-13 isotope effects in systems containing carbon dioxide, bicarbonate, carbonate, and metal ions, Canadian J. Chem., 43, 582&amp;ndash;589, 1965. </reference>
		<reference numeration="141" content_type="text">Ting, C. S., Rocap, G., King, J., Chisholm, S. W., 2002. Cyanobacterial photosynthesis in the oceans: the origins and significance of divergent light-harvesting strategies. Trends Microbiol. 10, 134&amp;ndash;142. </reference>
		<reference numeration="142" content_type="text">Treibs, A.: Chlorophyll and hemin derivatives in organic materials, Angew. Chem., 49, 682&amp;ndash;686, 1936. </reference>
		<reference numeration="143" content_type="text">Tyrrell, T.: The relative influences of nitrogen and phosphorus on oceanic primary production, Nature, 400, 525&amp;ndash;531, 1999. </reference>
		<reference numeration="144" content_type="text">Uemura, F. and Sawamura, K.: Notes on diatomaceous carbonate nodule in the Neogene Tertiary System, of Ajigasawa area, Aomori Prefecture, Bull. Geol. Survey Japan, 24, 185&amp;ndash;191, 1973 (in Japanese). </reference>
		<reference numeration="145" content_type="text">Venrick, E. L.: The distribution and significance of \textitRichelia intracellularis Schmidt in the North Pacific Central Gyre, Limnol. Oceanogr., 19, 437&amp;ndash;445, 1974. </reference>
		<reference numeration="146" content_type="text">Verne-Mismer, J., Ocampo, R., Bauder, H. J., Callot, H. J., and Albrecht, P.: Structural comparison of nickel, vanadyl, copper, and free base porphyrins from Oulad Abdoun oil shale (Maastrichtian, Morocco), Energy Fuels, 4, 639&amp;ndash;643, 1990. </reference>
		<reference numeration="147" content_type="text">Verne-Mismer, J., Ocampo, R., Callot, H. J., and Albrecht, P.: Molecular fossils of chlorophyll-$c $ of the 17-nor-DPEP series. Structure determination, synthesis, geochemical significance, Tetrahedron Lett., 29, 371&amp;ndash;374, 1988. </reference>
		<reference numeration="148" content_type="text">Villareal, T. A.: Marine nitrogen-fixing diatom&amp;ndash;cyanobacteria symbioses, in: Marine Pelagic Cyanobacteria: \textitTrichodesmium and Other Diazotrophs, Kluwer Academic Publishers, Dordrecht, 163&amp;ndash;174, 1992. </reference>
		<reference numeration="149" content_type="text">Voss, M., Dippner, J. W., and Montoya, J. P.: Nitrogen isotope patterns in the oxygen-deficient waters of the eastern tropical North Pacific Ocean, Deep Sea Res., Part I 48, 1905&amp;ndash;1921. , 2001. </reference>
		<reference numeration="150" content_type="text">Wada, E.: Nitrogen isotope fractionation and its significance in biogeochemical processes occurring in marine environments, in: Isotope Marine Chemistry, Uchida Rokkakudo, Tokyo, 375&amp;ndash;398, 1980. </reference>
		<reference numeration="151" content_type="text">Wada, E. and Hattori, A.: Nitrogen in the Sea: Forms, Abundances, and Rate Processes, CRC Press, Boca Raton, 1991. </reference>
		<reference numeration="152" content_type="text">Walker, J. S., Keely, B. J.: Distribution and significance of chlorophyll derivatives and oxidation products during the spring phytoplankton bloom in the Celtic Sea April 2002, Org. Chem., 35, 1289&amp;ndash;1298, 2004. </reference>
		<reference numeration="153" content_type="text">Waser, N. A. D., Harrison, P. J., Nielsen, B., Calvert, S. E.: Nitrogen isotope fractionation during the uptake and assimilation of nitrate, nitrite, ammonium, and urea by a marine diatom, Limnol. Oceanogr., 43, 215&amp;ndash;224, 1998a. </reference>
		<reference numeration="154" content_type="text">Waser, N. A., Yin, K. D., Yu, Z. M., Tada, K., Harrison, P. J., Turpin, D. H., Calvert, S. E.: Nitrogen isotope fractionation during nitrate, ammonium and urea uptake by marine diatoms and coccolithophores under various conditions of N availability, Mar. Ecol.-Prog. Ser., 169, 29&amp;ndash;41, 1998b. </reference>
		<reference numeration="155" content_type="text">White, A. E., Prahl, F. G., Letelier, R. M., and Popp, B. N.: Summer surface waters in the Gulf of California: Prime habitat for biological N&lt;sub&gt;2&lt;/sub&gt; fixation, Global Biogeochem. Cycles, 21, GB2017, doi:10.1029/2006GB002779, 2007. </reference>
		<reference numeration="156" content_type="text">Woodruff, F. and Savin, S. M.: Miocene deepwater oceanography, Paleoceanogr., 4, 87&amp;ndash;140, 1989. </reference>
		<reference numeration="157" content_type="text">Woodruff, F. and Savin, S.M.: Mid-Miocene isotope stratigraphy in the deep sea: high-resolution correlations, paleoclimatic cycles, and sediment preservation, Paleoceanogr., 6, 755&amp;ndash;806, 1991. </reference>
		<reference numeration="158" content_type="text">Yamamoto, K., Sakata, K., Watanabe, N., Yagi, A., Brinen, L. S., and Clardy, J.: Chlorophyllonic acid a methyl ester, a new chlorophyll-$a$ related compound isolated as an antioxidant from Short-Necked Clam, \textitRuditapes philippinarum, Tetrahedron Lett., 18, 2587&amp;ndash;2588, 1992. </reference>
		<reference numeration="159" content_type="text">Yamamoto, M., Naraoka, H., Ishiwatari, R., and Ogihara, S.: Carbon isotope signatures of bacterial 28-norhopanoic acids in Miocene&amp;ndash;Pliocene diatomaceous and phosphatic sediments, Chem. Geol., 218, 117&amp;ndash;133, 2005. </reference>
		<reference numeration="160" content_type="text">Yamamoto, M. and Watanabe, Y.: Biomarker geochemistry and paleoceanography of Miocene Onnagawa diatomaceous sediments, northern Honshu, Japan, in: Proc. 29th Int&apos;l. Geol. Congr. Part C: Siliceous, Phosphatic and Glauconitic Sediments of the Tertiary and Mesozoic, VSP, Utrecht, 53&amp;ndash;74, 1994. </reference>
		<reference numeration="161" content_type="text">York, J. K., Tomasky, G., Valiela, I., and Repeta, D. J.: Stable isotopic detection of ammonium and nitrate assimilation by phytoplankton in the Waquoit Bay estuarine system, Limnol. Oceanogr., 52, 144&amp;ndash;155, 2007. </reference>
		<reference numeration="162" content_type="text">Zehr, J., Waterbury, J., Turner, P., Montoya, J., Omoregie, E., Steward, G., Hansen, A., and Karl, D.: Unicellular cyanobacteria fix N&lt;sub&gt;2&lt;/sub&gt; in the subtropical North Pacific Ocean, Nature, 412, 635&amp;ndash;638, 2001. </reference>
	</references>
</article>

